Ipomoea triloba (trilobed morning glory): 116029153
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Entry
116029153 CDS
T07384
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116029153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116029153
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116029153
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
116029153
NCBI-ProteinID:
XP_031126917
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All DBs
Position
9:complement(4785400..4789789)
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AA seq
213 aa
AA seq
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MSENYGASDFIITLLSNCKFLASEYDDELAFTHVLREARITSYLHPFLGITTTSTTATED
KPLEALRLTSLGVIAALLKIDNPEDGQKIVHYLLESEVFPLFLSCMDRGDEPTQTVSALI
IAKILWRAEGLKYCSAYGERFFALVRALGRVVDRQPAERPSLGLLRSVIACYLRLSEVPR
AKDAFRNCIPARMTQHNFIAFIRYELYFVEKHT
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaattatggtgctagtgattttatcattactctcctttctaactgcaagttc
cttgcttcggagtatgatgatgagctggcttttacgcatgtgttgagggaagctaggata
acatcttaccttcacccgtttttgggaattactactactagtactactgcaactgaggat
aagcctttagaggctctgaggcttaccagcttgggcgtaattgctgcgcttcttaagatt
gataatccagaagatgggcaaaaaattgtccattatcttcttgaatcagaggttttccct
ctgtttctaagttgcatggatcgcggtgatgaacccacgcaaactgtatcggcactgata
attgcgaagatactgtggcgagcagaagggttgaaatactgcagtgcctatggcgaacgc
ttcttcgcgctggtgcgagcgttgggaagagtggtggacagacagcctgcagaaaggcct
agtttaggcttactaagatctgtcattgcttgttaccttaggctttctgaagttccaagg
gcaaaggatgcatttagaaactgtattcctgcaagaatgacccaacacaacttcatcgcc
ttcattcgttatgagctgtactttgtggaaaagcatacttga
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