Ipomoea triloba (trilobed morning glory): 116029290
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Entry
116029290 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116029290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116029290
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116029290
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
116029290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-RING_UBOX
FAIM1
Motif
Other DBs
NCBI-GeneID:
116029290
NCBI-ProteinID:
XP_031127079
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All DBs
Position
9:8726349..8729885
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AA seq
312 aa
AA seq
DB search
MMATGGGACREVVETQPMKSANFDMAAATKRRPEKSSALVKYAGGRGSEKMDRRLNNDVH
QLLECPVCRNSMLPPIFQCPNGHTLCASCNGAQENCPTCESELGDIRCLVLEKVAESLDL
PCRYQSAGCHDIFPYYRKLKHEKHCRFRPYKCPYAGSECCVTGDIPALVNHLREDHKVDM
HHGCTFNHRYVKSDPQQVENATWMLTVFNCHGNQFCLHFEAFPLGTTPVYMAFLRFMGED
DEAKLFSYCLEVGGHGRKLTWQGVPRSIRESHRKVRDSQDGLIIPRSIALYFSGGDGQEL
KLKVTGRIWKEQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatggctaccggaggtggcgcttgtagagaagtggtggaaacacagccgatgaagtct
gcaaattttgatatggccgcggcaacgaaacggagaccggagaaaagcagtgctctggtg
aagtatgccggcgggagaggtagtgagaagatggataggcgtttgaataacgacgtgcac
cagctgctggagtgccctgtctgcagaaattctatgcttccaccgatttttcagtgtcca
aatgggcacacactatgcgcaagctgcaatggagcgcaggagaattgtccgacttgcgaa
tctgagctgggagacatcaggtgcttagtcctggaaaaagtggcggagtcgttggatctt
ccctgcagataccaaagcgcggggtgtcatgatatattcccgtattacaggaagctgaag
cacgaaaaacattgtagattccgcccctacaaatgcccctacgcgggatcagagtgttgt
gtcacaggcgacatcccggccctggtaaaccatctcagggaggatcacaaggtcgacatg
catcacggctgcacctttaaccatcgctatgtcaagtcagatcctcaacaagttgaaaac
gcaacatggatgctcactgtgtttaactgtcatggaaaccagttctgcctgcattttgag
gcgttccctctgggaacgacgccggtgtacatggcctttctgcgcttcatgggcgaagac
gacgaggctaaattgttcagctattgcttggaagtaggcgggcatgggcgcaaactgaca
tggcaaggagtgccaaggagtatccgtgaaagccatagaaaggttcgggatagtcaagat
gggctcataattccaagaagcatagcgctttacttctccggcggcgatggccaagagctt
aagctaaaggtaacaggtcgaatatggaaggagcagtaa
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