Ipomoea triloba (trilobed morning glory): 116029321
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Entry
116029321 CDS
T07384
Name
(RefSeq) DNA topoisomerase 1 alpha-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116029321
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116029321
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Topoisomerases
116029321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
116029321
NCBI-ProteinID:
XP_031127131
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All DBs
Position
9:4804348..4811236
Genome browser
AA seq
882 aa
AA seq
DB search
MTASVQPNFTDMDDDDEMPLRFKRPNMASKSNVSNSEPNTSSSQKHDGQVGRQISNANSL
NGQNSTVQKDKTVPSSKASPVKSPLVSPRVSPPTSKTSPANTVAKNSKPLASPANRSTNL
NQCRSNTVVKEEKPSVSDPNDESDSEDDKPLSNRVGLSKSSSNHCNKVPGASTSGPKVVK
DEDSDDEMPLSTRIKMKSNPGAPTMKSPDTNKNNKPVLPKREQNGSASSTVPSKRSPVEI
KSAGQSSVKKPRLSDTSVSAKSKQPLVKAEKNEDDDEDNIPISQRIKKSSTPVNKSSSTK
KATAVVSSSRKIMKKKIVKKNSKYSQSSKVPPSSGEAQKWTTLVHNGVIFPPPYKPHGVK
MLYKGQPVDLTPEQEEVATMYAVMLDTEYMDKPKFKENFMNDWKKLLGRNHVIQSLEHCD
FSPIYDWHLKEKEKKKQMSSEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLF
RGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAFWNDPI
NPKEFKYVFLAASSTLKGQSDKEKYEKARLLKEHIDRIRAAYTKDFNSKDPVKRQVAVAT
YLIDKLALRAGNEKDDDEAETVGCCTLKVENVEPVPPDTLKFDFLGKDSIRYQNDVRVLE
PVFKAIQQFRKGKKDGDDLFDMLDTSKLNAHLKELMPGLTAKVFRTYNASITLQSELGRF
TDGGDVAEKVDVYQKANKQVAVICNHQRSVSKTHGVQISRLNEKIEELKGVLEELKIDLA
RSKKGKPPLKSADGKTKRNLAPEALQKKIDETNKKIKKMENQIQVKEDLKTVALGTSKIN
YLDPRITVAWCKRNEVPIEKMFNRSLLAKFAWAMDVEPDFTF
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttctgtgcaacctaatttcacagacatggatgatgatgatgagatgccctta
cgtttcaagcgtcctaacatggcatcaaagtcgaatgtatcaaactctgagccaaataca
tcatcatctcaaaagcatgatggacaggtagggaggcagatctccaatgccaattctctt
aatggtcaaaattctactgttcaaaaggacaaaacagtcccctcctccaaggcatcgcca
gtgaaatcaccattggttagcccaagagtgtcacctccaacaagcaagacatcaccagca
aatactgttgctaaaaactcaaaaccgttagcttctccagctaatcggtcaactaattta
aaccaatgcagatcaaacacggttgttaaggaggagaagccatctgtttcagatccaaat
gacgaatcagactctgaagatgataagccattgagtaatagggtaggattgtcaaaaagc
agttccaatcattgtaacaaagtgcctggtgcttcaacatcgggtccaaaggttgtaaag
gatgaagattcagatgacgaaatgcccctgtcaacaagaataaaaatgaaatccaatcca
ggggctcctaccatgaagtcgcctgacaccaataagaataataaacctgtactgcctaaa
cgtgagcaaaatggttctgcatcttctacagtgccgagtaagagatctccagttgagatc
aaatctgctggtcagagctcggttaaaaagcccaggctttctgatacttctgtttctgcc
aagtctaagcaaccattggtaaaagcagaaaagaatgaagacgatgatgaagataacatt
cctatatcacaaagaattaagaagtcatctactccggttaataagtcatcatctacaaaa
aaagcaactgcagttgtttcttcctcacgtaaaataatgaaaaagaaaatagtgaagaaa
aactctaaatactctcagtcatcaaaggtaccccccagctctggtgaagcacaaaaatgg
actactttggttcacaatggtgtaatttttcccccaccatacaagcctcacggagttaag
atgctatataagggacaaccagttgatctcacaccagagcaagaggaggttgcaacaatg
tatgcagtgatgctagatacagagtacatggacaaacctaaattcaaagagaacttcatg
aatgactggaagaaactacttggaagaaatcatgtaattcagagtttggagcactgtgat
ttcagccctatatatgactggcatctgaaagagaaagaaaagaagaagcaaatgagttca
gaagagaagaaggctttaaaagaagagaaactgaagcaagaagagaagtatatgtgggcc
attcttgatggtgtaaaagagaaggtggggaacttcagggttgaaccacctggattgttc
agaggccgtggagaacatccaaagatgggaaagcttaaaaaacgcatccgtccaagtgat
attacaataaatataggaaaagatgctccaatcccagaatgccccatccctggtgaaagc
tggaaggaaataaggcatgacaacaccgtgacatggttagcattctggaatgaccctatt
aatccaaaagaattcaaatatgttttcctggctgctagcagcaccttgaaagggcagagt
gacaaggagaagtatgagaaagcaaggcttttaaaggagcacatagatcgcatcagagct
gcttatactaaagattttaatagtaaagatcctgttaagcgacaagtagcagttgctacc
tatcttattgataaactagctctcagggcaggcaatgaaaaggatgatgatgaagctgaa
acagttggttgctgcactttgaaagtagagaatgtggagccagtgcctccagatactctg
aagtttgatttccttggtaaagattctatcagatatcagaatgatgttcgggtcttggag
cctgttttcaaagcaattcaacagtttcgaaaagggaagaaggacggtgatgatcttttt
gacatgcttgatactagtaagctgaatgctcatttaaaagaactcatgcctggccttaca
gcaaaagttttccgtacatataatgcctctatcacattgcaatcagagttgggtaggttc
acagatggtggagatgttgcagagaaagtcgatgtatatcaaaaggcaaacaagcaggtg
gcagtgatttgcaatcatcaacgcagtgtttctaagacgcacggtgtacaaatttctcgc
ttgaatgagaagatagaagagttaaagggtgttttagaggaactgaagattgatttggcc
cggtcaaagaaaggaaagcctccactgaagtctgctgatgggaagacaaagaggaatttg
gcacctgaagcattgcagaaaaagattgatgaaacaaataaaaagattaagaagatggag
aaccaaatacaggtaaaagaggatttgaaaacagtggcattaggcacatccaagattaac
taccttgatccaaggatcacggttgcatggtgcaaacgcaatgaggttcccattgaaaag
atgttcaacaggtccctcctggcaaagtttgcgtgggccatggatgtcgaaccggatttc
actttctaa
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