Ipomoea triloba (trilobed morning glory): 116029361
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Entry
116029361 CDS
T07384
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116029361
Spliceosome [BR:
itr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116029361
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_long
Motif
Other DBs
NCBI-GeneID:
116029361
NCBI-ProteinID:
XP_031127188
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Position
9:1111572..1115759
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AA seq
836 aa
AA seq
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MLQSSHTATQLTVSLSSCSRQETHKIRSSPKFSMRTAFSFLHTFSVSVLTRSGHWNRRGL
LCTASLLRNSSATSPHLRFYPGSLVYCSTLRSSSPSASTFFEQLVYEPEESLKHEEDLSS
STEREIFNFDSSFESIELKRFDSPVVDVKELEELPEEWRRSRLAWLCKELPAHKHNTLIR
ILNAQRKWLRQEDATYIVCHCMRIRENETAFRVYKWMMLQHWFQFDFALATRLADYLGKE
RKYLKCREVYDDILNQGRVPAESTFHILVVAYLSSSGQSVVEEAFSIYSRMIQLGGYRPR
LSLHNSLFKALVGKQGGSFEETLKQAEFIYHNLTTSGLQIHKDIYGGLIWLHSYQDLIDK
DRIALLRTEMRLRGIEESTDVLVSVLRACSKNGDAEEAERTWSKLLSSNPSPPPQAFMFR
MVTYAKIGEHMKCLEIFRLMQEELGSTAAIAYHKIIEVLSKAEKLELAESIMTEFIDSGL
GPLRPSFIDMMKMYSTLGLHEKLESTFFQCLKKCRPNRKVFSIYLDLLVQIGSIDEAGEV
FNQMIENTSIGVNAHCCNSILRGYLSQGEHVKAEKVYRLMHLKKYDIDSSLIEKLNFVLS
LRQKVVKEPIRQKLSIEQREVMVGLLLGGLQIKSDAERKKHLVHFEFSENLKHHSVLRRH
MYDKCREWLACTDKLAGDDDDDDVPWVFTTIPHSYFGFYADQFWRKGQPTIPKLIHRWLS
PRVLAYWYMYSGYRTSSGDILLRLKGSQEGIENIVKAFKAKSLDCRLKRKGSSVWIGFLG
DKSMWFWKLVEPFILDDLKDCLRPRGNLSDDLEGIQTIDSGSESDEKPSECSDGEM
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgctacagagcagccatacagcaacccagctgaccgtcagtctctcttcgtgttctcgt
caagaaacccacaagatccgcagttcacccaaattttccatgcgcacagcattcagcttc
ctccacacattctccgtctccgttctcactcgcagtggccattggaaccgacgcggcctc
ttatgcacggcttccctgctccggaactcctcagcaacgtctcctcatcttcgtttctac
cctggtagcctggtatactgctccacgctccgctcatcctctccttcggctagtactttc
tttgaacagctagtgtacgagcctgaagaatccctgaaacatgaggaggacttgtcgagc
agcactgagagggaaattttcaattttgatagctccttcgagtctatcgagttgaagcgg
ttcgattcgccggttgtagatgtcaaggagcttgaggaacttcccgaagagtggcgccgg
tcaagattggcctggctttgcaaggagcttcctgcgcataagcataatactttgattcgg
attctcaatgctcagaggaagtggctcagacaagaagatgctacttatattgtctgtcat
tgtatgcgaattcgtgaaaatgagactgctttcagggtgtacaaatggatgatgctgcaa
cattggtttcaatttgattttgctctagctacgaggctagcagattatttgggtaaggag
cgcaagtacttgaagtgccgggaggtttatgatgacatacttaatcaagggcgagtgcct
gctgagtcaactttccatattctggtagttgcatatcttagttcatctggtcaatcagtt
gtggaagaagcattcagcatttatagccgcatgatccagctgggaggttataggcctcgt
cttagcttacacaattctctgtttaaagctctggtgggaaaacaaggaggttcttttgag
gaaactctaaaacaagcagagtttatttatcacaatttgactacttcagggcttcagata
cacaaggatatctatggtggtcttatatggctccacagttatcaggatttaatagataag
gatagaattgcattattgagaacagagatgcgtttgagagggattgaagaaagcacagat
gtacttgtgtcagtcttgagagcttgctcaaagaatggggatgcagaggaagctgaaaga
acttggtcaaaacttctttcctctaatcctagtcctccaccacaagcttttatgtttaga
atggtaacctatgcaaagattggagagcatatgaaatgtttggagatatttaggctaatg
caagaggagttgggttctactgctgccatagcatatcataaaatcattgaggtgttgtct
aaagctgaaaagctagaactggcagagtcgatcatgacagagttcattgacagtggtctg
gggccgttgcggccatcatttattgatatgatgaaaatgtactccactttaggcttacat
gagaaattggagtcaactttctttcagtgtcttaaaaaatgccgtccaaataggaaagtc
ttcagcatatacttggatttattggttcaaattggcagtattgacgaggcaggagaagtc
ttcaatcagatgattgagaacacgtcaattggtgtcaatgcacattgttgcaatagcatt
ttgagaggatacctctcccagggggagcatgtaaaggcagaaaaagtatataggttgatg
cacctgaagaaatatgatattgattcttccttgatagaaaagctcaattttgttctgagt
ttgcgccagaaggttgtcaaagaacccataaggcagaagctcagcatagaacagagagag
gtcatggtggggttgttgttgggtggtttgcaaattaaatcagatgcagagaggaagaaa
catttagtccattttgaattcagtgaaaacttgaagcatcattccgttttaaggagacac
atgtatgacaagtgtcgtgagtggttagcttgtacagataaactggcaggtgatgatgat
gatgatgatgttccttgggtgtttaccaccattccacattcttattttggtttttatgct
gaccaattctggcgaaaaggtcaacctactattccaaaactaatccacagatggttgtca
ccccgagttcttgcttactggtacatgtactcaggctaccggacatcatcaggggatatt
ctgttgagattaaaaggaagccaagagggcattgaaaatattgtcaaagcattcaaggcc
aaatcattggattgcagactaaaaaggaagggaagctcggtttggataggttttctggga
gataagtctatgtggttctggaaactggttgaaccctttattcttgatgatctaaaagat
tgcctgagaccaagaggcaacctatcggatgatttggaaggaattcaaaccattgacagc
gggtctgaatctgatgagaagccctctgagtgcagtgatggtgagatgtaa
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