Ipomoea triloba (trilobed morning glory): 116029372
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Entry
116029372 CDS
T07384
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116029372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116029372
Enzymes [BR:
itr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116029372
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116029372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
116029372
NCBI-ProteinID:
XP_031127210
LinkDB
All DBs
Position
9:10813662..10830450
Genome browser
AA seq
1182 aa
AA seq
DB search
MEEKVAGGGATKRPHLMKEKDYTALKELYAHHIESFDHMVDQGLETMLMAIKPVEVSDPF
SGHKLRIWFGKPELFPPQKDRGYKSVQDALYPFECRQAKLSYTGKFMVDICLQYDDGAVV
REKFNFGQFPIMLKSKLCQLRNVHSPRKLASCKEDPSEMGGYFILNGLERVVRLLILPKR
NYPTSMVRNSFRDKREGYTDKAIAIRCVREDQSAVTVRLYYLSNGSARLGFWIQGREYLL
PAGVILKALVDTTDRDIYVSLTCVYNERYDRAKGSVGTQLVGERAKIILDEVQSLSLFTR
SQCLQHIGEYFQPVMSGMEKESYSAVAEAVLRNFILVHLDNNHDKFNLLIFMLQKLFSLI
DQTSVPDNPDSLQNQEILLPGHLITIYLKEKLEDWLARTKQSLKEQIDSQNTKFQFSSLA
DVKKIIERNGPRQISTAIENMLKTGRLATQSGLDLQQRAGMTVMAERLNFLRFLSHFRAV
HRGAALAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHLAAACRVTSYYDAKGNIKD
FFKIRLSISSVLTSIGMTPSLPRLAQAGPPELLSVLLDGRVVGTMPFDLVEKAVAHLRRL
KLSAVSAIPVDLEVGYIPPSMGGGYPGLFLFTCPSRFVRPVRNISVSPQDGNEIELIGPF
EQVYMEISCPDGRDGGRRNLFPATHEEIHPTNMLSVVGNLTPWSDHNQSPRNMYQCQMGK
QTMGFSSQAINCRADQKLYHLQTPQTPIVRTRAYEKYCIDDYPLGTNAIVAVLAYSGYDM
EDAMVLNKSSVDRGMCHGHVYQTETIDLAEQSVKSDRSQKMFRRSNLEKSSHHLIDSDGL
PYVGQRINPNEPYYSVYNEITSETKSIKLKGSESVVVDYVAVDTKTKNNIQKANIRLRRT
RNPIIGDKFSSRHGQKGVCSQLWQDIDMPFSSVTGMRPDLIINPHAFPSRMTIAMLLESI
AAKGGALRGNFVDATPFYNSVKRESKSGSDSLVDELGSLLKAHGFNYHGVEVLYSGVYGT
ELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDSLL
AHGAAYLLHDRLHTSSDHHIADVCSICGSILTSSLIQPPKREMRHIAGLPPARDPKKVVC
VACKTSKGMETVSMPYVFKYLAAELAAMNIKMNLQMSNGSGA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaagtagcaggtggtggagcgacgaagcggccgcacttgatgaaggagaaa
gactacacggcactgaaagagttgtacgctcatcatatagagtcgttcgatcacatggtg
gaccaaggacttgagactatgcttatggccatcaagcccgtcgaggtctctgatcccttc
tccggccacaagcttagaatttggtttgggaaacctgaattattcccgcctcaaaaggat
cgtggttacaagtctgtacaggatgctctgtatccctttgagtgtagacaagcaaaactt
tcatacacaggcaagtttatggtggatatttgccttcagtacgatgatggagctgttgta
agagaaaaatttaatttcggccagtttccaatcatgttgaagtcaaagctctgccaattg
agaaatgttcacagccccagaaaattagcatcttgcaaggaagatccatcagaaatgggc
gggtacttcattttgaatggtcttgagcgagtggttcggcttttgatattaccaaaacga
aactatccaacgagtatggtgcggaattcatttcgtgataagcgagaaggttatactgat
aaagctattgcaataaggtgtgtaagagaagaccaatctgcagtgacggtgagactgtat
tatcttagtaatggaagtgcaagacttggattctggatacaaggaagggaatacttgctt
cctgctggtgtcatattaaaggcccttgttgacacaactgatcgtgatatatatgtcagt
ttaacatgtgtttacaatgagagatatgatcgagcaaagggatctgttggcacccagctt
gttggtgaaagggcaaaaattattctggatgaagttcagagcctttctctttttactcgg
agccagtgcctccagcatattggagaatattttcaacctgttatgtctgggatggaaaaa
gaaagttattctgctgttgctgaagctgttcttcgaaacttcatacttgtccatttggat
aacaatcatgataagtttaatctgctgatcttcatgttgcagaagcttttttctctcata
gatcagacttctgttccagacaatcccgactccttgcaaaatcaagaaattttgctgcct
ggtcacttgataacaatatatctcaaggaaaagctagaagattggttggcaaggacaaaa
cagtcacttaaagagcaaattgacagccaaaacacgaagtttcaatttagcagcttggct
gatgtgaagaaaattattgagagaaatggcccgagacagataagtacagctattgagaat
atgttaaagactggaagattggcgacccagtctggtcttgatttgcagcagagagctggg
atgacagttatggcagaaaggttaaattttctgcgtttcctttcacattttagagctgtc
catcgaggtgctgcccttgctggtcttcgtactactagtgtgcggaaattgttacctgaa
tcttggggtttcttatgtcctgttcatacacctgatggggagccatgtgggttgctaaac
catttagctgctgcttgccgtgttacttcatattatgatgccaaaggaaacatcaaagat
ttcttcaaaattagattgtccatttcaagtgtgctaacaagtattggtatgaccccatca
ttgccaaggcttgcccaggcaggccctcctgaattgctatctgttcttctagatggtcgt
gttgtaggaactatgccatttgatcttgttgaaaaagctgttgcccacttgcgaagattg
aaactgtcagcagtatcagcgattccggttgatttggaggtgggatatatacctccgagc
atgggcgggggatatcctggcttatttctgttcacatgcccttctagatttgtccgccca
gttagaaacatctctgtttctcctcaagatggcaatgaaattgaactcattggacccttc
gaacaggtgtatatggagataagctgtccagatggcagagatggaggaagaagaaattta
tttcctgccactcatgaggaaatccatccaacaaatatgttgagtgttgttggtaatttg
acaccttggtctgatcataatcagagtccacgtaatatgtatcagtgtcagatggggaaa
caaaccatgggtttctcttcacaagcaataaactgtcgtgctgatcaaaagctctaccac
cttcagaccccgcagactcccattgtacgtactagagcatatgaaaaatactgcattgat
gactatcctttaggaacaaatgcaattgtagctgttctggcttattctggatatgacatg
gaggatgctatggtcttaaataaatcatctgttgaccgtgggatgtgccatgggcacgta
taccagacagaaacaattgatttagctgaacagagtgtcaagtcagatcgttctcagaaa
atgtttaggagaagcaatcttgagaagtcatctcatcacctgattgattctgatggactt
ccatatgttggccagaggataaatcctaatgagccatattatagcgtctacaatgagata
acaagtgaaaccaaaagcatcaaattgaaggggtcagaatctgttgttgttgactatgtt
gctgttgatactaaaaccaaaaataatattcaaaaggcaaacatacggttgcggcgtact
aggaatcctataattggagacaaatttagcagtaggcatgggcaaaagggggtttgttct
caactctggcaagatattgatatgcctttctcaagtgttacaggaatgaggccagatcta
atcattaatcctcatgcattcccttcaaggatgactattgcaatgcttttggaatcaatt
gctgctaagggaggagctttacgtgggaattttgttgatgcaacgccattttataactca
gttaaaagagaaagcaaatctggatctgattcactcgttgatgaacttggttctttgttg
aaagctcatgggttcaattaccatggtgtagaggtactgtatagtggagtttatgggaca
gagctgacatgtgaaatatttattgggcctgtttattatcaaaggcttcggcacatggtt
tcggataagtttcaggtgcggtctactggaacagtggaccaaatcacccgacagccaatt
aaaggaagaaaacgtggtggaggtatccggttcggagaaatggagcgagactcccttttg
gcacacggggcagcatatttgttacacgatagacttcatacaagttcagatcaccatatt
gcagatgtttgttcaatttgtggaagcattctcacatcatcactcatccagccaccaaaa
cgggaaatgcgtcatatagctgggctaccacctgccagagatcccaagaaggttgtatgt
gttgcttgcaaaacgagtaaaggtatggagacagtctcaatgccatatgtgtttaagtat
ttggcagcagaattagcagccatgaacataaagatgaacctccagatgagtaacgggtca
ggagcttga
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integrated database retrieval system
