Ipomoea triloba (trilobed morning glory): 116030003
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Entry
116030003 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116030003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116030003
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116030003
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
HECT type E3
116030003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
116030003
NCBI-ProteinID:
XP_031127939
LinkDB
All DBs
Position
9:complement(385937..395983)
Genome browser
AA seq
1888 aa
AA seq
DB search
METRSRKRAEANSSAPSSSSGPTTRAAKRARLSVSSTPTSTTATATNSASIPTRSRIATR
SQDSLLSSTPMDSTNESSGSAPRSRRGKNPTHAPDKDNSDKGKEKEQVRDRDRDREAERS
LRLNIDSGGADDDDNDSEGGVGMLHPNLSSASSALQGLLRKLGAGLDDLIPSSAIGSTSS
SHQSGRLKKILSGLRADGEEGKQVEALSQLCDMLSIGTEDSLSTFSVDSFVPVLVGLLNH
ESNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSYFVARLLTIEYMDLAEQSLQALKKI
SQEHPTACLRAGALMAVLSYLDFFSTGVQRVALFTAANMCKKLPSDAADFVMEAVPLLTN
LLQYHDSKVLEHASICLTRIAEAFASSPEKLDELCNHGLVREAAALISSSSSGGGQSSLS
TSTYTGLIRLLSTCASGSAIGAKTLLHLGISGILKEILSGSGLVSTMSVSPALSRPPDQI
FEIVNLANELLPPLPQGTISLPVSSNLFIKGSFTKKFCAGGSSKQEDVNASSQDIAQEVS
AREKLLNEQPEFLRQFGMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTADMIQSLN
SVTNISSFLAGVLAWKDPQVLVPALQIAEILMEKLPGFFSKMFVREGVVHAVNALIIAEA
HVTPSQPPSFEKDNDCITGSSRSRRYRRRGGNSNIDMSSTEELKNSVPNLLSPPNSVEVP
NVNSNIRMTVSACAKRFKEKYFPSDLESTEAGVTDDLLRLKNLCNKLNAGIDGQMTKSKG
KSKTSGPRLGDISTSKEENLAGLITEMLGELSKGDGVSTFEFIGSGVVTSLLNYFTCGYF
SKERISNANLSRLRQQAMRRYRSFIAVALPPGVEGSSVPMGILVQKLQNALSSLERFPVV
LSHTSRSLSGSARLSSGLGALAQPFKLRLCRAQGEKTLRDYSSNVVLIDPLASLAAVEDF
LWPRIQRIESGPKAPASAGNSEAWSVLPASSTTPSVPPRHSTRSRSVTNMNDGAKESSQE
NNASSSKGKGKAVLKSGQEEGRGPQTRNAARRRAALDKEAQAQPVNGDSNSEEDELVSPV
DIIDDLVIEEDDISDDDDEDDRDDVLRDDPLDSLPYCMPEKVHDVKLGDSSEESPVVQTP
SNSQANAGGGSSSRDGSIRGSDSLEFRGGSSYSSRGAMSFAAAAMAGLGSSNGRGVRGGS
RDRQGRPIFTSNDTGRLIFSAGGKQLNRHLTIYQAIQRQLVLDDDDDDRHGGNDFVSSDG
SRLWSDIYTITYQRADNQADRGMNGTGTSTSSKSKKASSSTALSEDSSLHASLLDSILLG
ELPCDLEKSNPTYNILALLRVLDILNQLAPRLQFLSVIEDFSEGKISSLDELSVSSVKIP
PEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLS
RALYRLQQQGADGSTNEREVRFGRLQRQKVRVSRNRILDSAAKVMDMYSSQKAVLEVEYF
GEVGTGLGPTLEFYTLLSHDLQKAGLGMWRTGLTFHKHGMEMDVDGEVNGKTVDGGEQDL
IIAPLGLFPCPWPPSAENSEGQPLFKAIEYFRLLGRVMAKALQDGRLLDLPLSTAFYKLV
LGQELDLYDILSFDTELGKTLQELQALVYRKQHLESMGNNSQVKITDLCFRGTPVEDLCL
DFTLPGYPEYILKAGDENVDLSNLEEYISLVVDATIKTGIVRQIEAFRSGFNQVFDISTL
QIFSPTELDYLLCGRRELWKAETLVDHIKFDHGYNAKSPAILNLLEIMGDFSPEQQRAFL
QFVTGAPRLPPGGLAVLNPKLTIVRKHSSSTGNTSVSGNAASESADDDLPSVMTCANYLK
LPPYSTKEIMYKKLVYAINEGQGSFDLS
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgcagccggaagcgggcggaggccaactcttcagcgccctcttcttcctct
ggtcccaccacccgcgctgccaagcgagctcgtctttccgtctcatctactcccacatcc
actactgccaccgccaccaattccgcgtcgatccccactcgctctcgcatcgcaactcgt
tctcaggactcgttactatcttccacacccatggactccaccaatgaatcctccggttcc
gccccgcgcagccgccgtggtaagaaccctactcatgctccagataaggataattccgat
aaaggaaaggagaaagagcaagttagggatagggatagggacagggaagctgagagaagc
ctcaggttgaatattgattcaggtggcgctgatgacgatgacaatgacagtgagggtggt
gttggaatgctgcatccaaatttatcttcggcaagcagtgcacttcaggggttgctcagg
aaattgggtgccggattggatgacctcatacccagctcagcaataggatcaacctcatca
tcacatcagagtggtcggctgaagaagattttgtcagggttgagagcagatggtgaggaa
ggaaagcaagttgaggctttgtctcagctctgtgatatgctttctattggaactgaagat
tcactcagcaccttttctgtggattcttttgttcctgtgctggttgggctacttaatcac
gagagtaatccagatatcatgctgcttgcagcccgtgcattaacccatctggttgatgtt
ctgccctcttcatgtgctgctgttgtgcattatggtgcagtttcatacttcgttgctcgc
ttgctcacaattgaatacatggacttggctgaacagtcattacaagctctaaagaagata
tctcaggaacaccccactgcttgcctgagagctggtgcccttatggccgtgctttcctac
cttgacttcttttctactggagttcagcgagttgcattgtttactgctgcaaatatgtgc
aagaaactcccttctgatgcagctgactttgtgatggaagctgtaccgttgctgacaaac
ctcctccaatatcatgactcaaaggtcctagaacatgcttccatctgcttgactcggatt
gctgaggcatttgcatcttctccagagaagttggatgaattatgcaatcatggacttgtt
agggaagcagctgcactcatttcctcaagcagttctggtggcggtcagtcctcactcagc
acttcaacatacacaggattgattcgacttctctcaacatgtgcgagcggttctgctata
ggagcaaaaactttgctgcaccttggtatcagtggtattctcaaagaaattctttcagga
tctggccttgttagcacaatgtctgtttcacctgctttgagtagaccacctgatcagatt
tttgagattgtgaaccttgctaatgagctacttcccccattgcctcaaggaacaatctct
cttccagtcagtagtaacttgtttattaaaggttcttttacaaagaaattttgtgctgga
ggttctagcaagcaggaggatgtaaatgctagttctcaggatattgcacaggaggtttca
gcccgtgaaaaacttcttaatgagcagcctgaatttctgcgtcaatttggaatggatctt
cttccagttctaattcagatatatgggtccagtgtgaatggcccagtacgtcacaaatgt
ctctcggtgattggaaagcttatgtacttcagcactgcagatatgattcagtccttgaat
agtgttactaacatatcaagtttcttggctggagtgttagcttggaaagatccccaagta
ttggtgcctgcccttcaaattgcagaaattttaatggaaaagctccctggtttcttttct
aagatgtttgtgagagagggtgttgttcatgctgttaatgcactaataatagctgaggct
catgttacaccttcacagccaccttcctttgagaaggacaatgattgtataacaggatca
tcacgttctaggcgttaccgacgtcgtggtggtaattcaaatattgatatgtcttctact
gaagaactcaaaaattcagttccaaatctgctctcacctccaaattcagttgaagttcct
aatgtcaattccaatattcgcatgactgtaagtgcttgtgccaaacgcttcaaagagaaa
tatttcccttcagatctcgagtcaactgaggctggtgtgacagatgatcttctacggctg
aagaatctttgcaataagttgaatgctggtattgatggacagatgacaaaatcgaaggga
aaatccaaaacttctggtcctcgacttggtgatatttccaccagtaaagaagaaaacctt
gctggtctgattactgaaatgctgggggagctcagtaaaggagatggtgtttccactttt
gagtttattggtagtggtgttgtgacttccttgctgaactattttacatgcgggtacttc
tccaaggaaagaatttcaaatgctaatctgtctaggcttcgacaacaagcaatgagaagg
tacaggtctttcattgcagttgcccttcctcctggtgttgaaggaagttctgttcccatg
ggtattttggttcaaaagcttcaaaatgctctatcttccttggagcgcttccctgttgtg
ttgagccacacttctaggtcattgagtggaagtgcacgactatcttctggcttaggtgct
ttggctcaaccattcaagttgcgtctctgtagggcacaaggtgaaaagacccttcgtgat
tattcctcaaatgtagttttgattgatccactagcaagtttagcagctgttgaagacttc
ctctggcctcgtatccaacgaattgagtctggtccgaaggcacctgcatcagctggaaac
tctgaggcatggtctgttctaccagcatcttctactactccttctgttcctcctcgtcat
tctaccagatcaaggtctgttactaatatgaatgatggtgctaaagagtcatcacaagaa
aacaatgcaagctcatcaaaaggaaagggtaaggctgttcttaagtcaggtcaagaagag
ggaagaggaccacagacaagaaatgctgctcgtagaagagcagctttggataaggaagca
caggcacaacctgttaatggggattccaattctgaggaagatgagctggtttctcctgtt
gacattattgatgatttggtgattgaagaagatgatatatctgatgatgatgatgaagat
gaccgtgatgatgttcttagagatgatccacttgattcacttccttattgcatgccagaa
aaagtgcatgatgttaaattaggggactcttcagaggagagtccagttgtccaaacacca
agtaatagtcaagcaaatgctggtggtggttccagcagcagagatggttctatccgggga
tctgattctcttgagtttagaggtgggagttcttatagttctaggggtgcaatgtcattt
gctgcagctgctatggcaggccttgggtctagtaatggtagaggtgttagaggaggaagt
agggatcgtcaaggacggcctatatttacttctaacgatacaggaagattgatattttct
gccggtgggaaacaattaaataggcacttaacaatctaccaggccattcaacggcagctt
gtcctggatgatgatgatgatgatagacatggaggcaatgattttgtatcaagtgatgga
agcagactgtggtctgatatatacaccatcacataccaaagggcagataaccaagctgat
agaggtatgaatggtactgggacatcaacttcctctaagtctaagaaagctagttcttca
acagctttgagtgaggattcctcactccatgcatcactattagatagtattttgctggga
gagctcccctgtgatctggaaaaaagcaaccctacctataatattttagcacttttacgt
gtacttgatattttgaatcagcttgcaccacggttacagtttctgtcagtgattgaagat
ttctccgaaggaaaaatatcaagtctggatgaactcagtgtgagtagtgtcaaaatccct
ccagaggaatttgtcaatagtaagcttactccgaagttggctcggcagatccaggatgca
cttgcactctgtagtggctctcttccatcatggtgttaccagctaaccaaggcttgtcca
tttctatttccatttgagactcgccgccagtatttctattcaactgcttttgggttgtct
cgagcattatatcgacttcagcagcaaggtgctgatgggtcgacaaatgaaagagaggta
aggtttgggagattacagcgccagaaagtacgtgtctcccggaatcgcatactggattct
gctgcaaaagtaatggacatgtactctagccaaaaagctgttcttgaagttgaatatttt
ggtgaagttggcactggtttgggtcctactctggagttctacacccttttaagtcatgat
ctacagaaagcagggctagggatgtggaggacaggtctaacattccacaaacatggaatg
gaaatggatgtagatggggaagtaaatggaaaaactgttgatgggggtgaacaagatctc
attatagcacctcttgggttattcccttgtccctggccaccaagtgctgaaaattcagag
ggtcagccgctttttaaggcaattgaatatttccggcttctgggtcgcgtgatggctaaa
gcacttcaggatgggcggctcttagaccttccattatcaactgccttctataagcttgtg
cttggccaagaacttgatctgtatgatattctttcttttgatactgaactgggcaagact
ttacaagagttacaagctcttgtttatcggaaacagcatttggaatcgatggggaacaat
agccaagtcaaaattactgatttatgttttcgtgggactccagttgaagacctttgctta
gatttcacccttccaggttatcctgaatatattctgaaagctggtgatgagaatgttgat
cttagtaatctggaagagtacatttctttggtggttgatgctactatcaagactggaatt
gtgcggcaaattgaagcatttagatctggtttcaatcaggtatttgacatttcaacacta
caaatattttctccaactgagctggactatttgctttgtgggcgtagagagctgtggaag
gctgagacattggtggatcacatcaagtttgatcatggttacaatgccaagagtcctgca
attttaaatttgctggagatcatgggagacttctctcctgaacaacaaagagcctttctt
caatttgttactggtgctcctaggcttcctccaggcggtcttgcagtgttgaatccgaag
ttaacaatcgtgaggaagcattcttcgtctacgggaaacacatcagtcagtggtaatgcg
gcatccgaatctgcagatgatgacctgcctagtgtgatgacttgtgccaattacttgaag
cttcctccatactccaccaaggaaattatgtacaagaaattagtgtatgcgatcaatgaa
ggtcaaggatcctttgatttgtcctag
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