Ipomoea triloba (trilobed morning glory): 116030370
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Entry
116030370 CDS
T07384
Name
(RefSeq) replication protein A 32 kDa subunit B isoform X1
KO
K10739
replication factor A2
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03030
DNA replication
itr03420
Nucleotide excision repair
itr03430
Mismatch repair
itr03440
Homologous recombination
itr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116030370
03420 Nucleotide excision repair
116030370
03430 Mismatch repair
116030370
03440 Homologous recombination
116030370
03460 Fanconi anemia pathway
116030370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116030370
03400 DNA repair and recombination proteins [BR:
itr03400
]
116030370
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
116030370
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
116030370
MMR (mismatch excision repair)
116030370
DSBR (double strand breaks repair)
HR (homologous recombination)
116030370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
TrmB
Motif
Other DBs
NCBI-GeneID:
116030370
NCBI-ProteinID:
XP_031128461
LinkDB
All DBs
Position
9:9092681..9096454
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AA seq
279 aa
AA seq
DB search
MYGGSASFDGNAAFAGGGFMPSQATQTATDPSYSSSKSRDSQSLLPLTVKQIIDAVHSSD
DKINFLVDGVDVNNVKLVGIVFNMTDRATDFSFVLDDGTGRIDCYRWLNESFDKMEMAAI
SNGMYVKLHGHLKGFQGKKQLMTYSVRPLDDYNEIAHHFAEAIYAYCHNTKLRKLQDSAN
TATHVPNSAMNTPMKGYQVSQPNFSGYSVDGITGIEKMVLSYLQQPQCLALEKGVHRNEL
AQQLNVPIDKILPAMESLESEGLVYSTIDECHYKSTGNG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtgggagcgcttcgttcgacggcaacgccgccttcgccggaggcggtttcatg
ccttctcaggcgactcaaactgctaccgatccttcctattcttcgtcaaagagtcgcgat
tcccaatctttgcttccgttgacagtgaagcagataatagatgctgtacattccagcgac
gataagataaactttctagttgatggtgttgacgtgaataatgtgaaactagtggggatt
gtgttcaacatgactgatagggccactgatttttcatttgtgcttgatgatggaacaggg
cgcattgactgctatcgatggctgaatgaatcctttgacaaaatggaaatggcagctatc
tcaaatggtatgtatgttaaactccatggacacttgaagggtttccagggcaagaaacag
ttgatgacttactctgtcaggcctcttgatgattataatgagattgcgcatcactttgct
gaagctatttatgcttattgtcacaacaccaagttacggaagcttcaagacagtgctaat
actgccacccatgtgcctaattcagctatgaacacacctatgaaggggtaccaagtttcc
caaccaaatttttctgggtatagtgtggatggaattacgggcatagaaaagatggtctta
agctatttgcagcagccccaatgccttgctctggaaaaaggggttcaccgcaatgagctt
gctcaacaactaaacgttcctattgataagatcttaccagcgatggaatcattggagtca
gaagggcttgtttactccacaatagatgagtgtcactacaagtccaccggtaatgggtga
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