Ipomoea triloba (trilobed morning glory): 116030519
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Entry
116030519 CDS
T07384
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116030519
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
itr01002
]
116030519
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116030519
04121 Ubiquitin system [BR:
itr04121
]
116030519
Enzymes [BR:
itr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116030519
Peptidases and inhibitors [BR:
itr01002
]
Metallo peptidases
Family M67
116030519
Membrane trafficking [BR:
itr04131
]
Endosome - Lysosome transport
Others
Others
116030519
Ubiquitin system [BR:
itr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
116030519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
116030519
NCBI-ProteinID:
XP_031128652
LinkDB
All DBs
Position
1:complement(37720023..37727985)
Genome browser
AA seq
512 aa
AA seq
DB search
MSRPSINVSFMTRKVDVDNRIPLRNYYRIADNILRQANIYRGEKNIIDLYIMLLRYSSLL
TETIPCHRDYQTLYPKERTSSRKTLLRVLDELEALKPTFLRQVNELEKRQVKAQPYQLES
SEITPTVSSRNSLGRPALDNKASSGYDNKWVVSSTTSKWKQNNDHPQVSSLNSIDLQFQK
LSLSLPLPKQETLSRHSLLGPNGLHGQWHGPSAEIKVNYPTNTYLDSDDMSSLKQVGHYD
RIAFKDADSKVDNPTMESVLSLDDGRWSQPTEDASSFYDDVRNDNLSSNIIHQPSPPPVL
AQVQQEYRPISPSRVADPRPGPVKPQDGMTGSNAYQHLHIPVRMMEDFLRLAKANTTKNL
ETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDKLSLFPLGWIHTHPS
QTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDESSPHGIFHLSDPGGVSVIRNCQQRGFH
PHEEAEDGSPIYEHCSHVYMNANLKFDVVDLR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggccgtcgatcaacgtcagtttcatgactcggaaggtcgacgtcgacaatcgg
ataccacttcgcaattactatcggatcgcggataatatactccggcaggcaaatatctac
cgaggagagaagaacattattgatttgtatataatgctgcttagatattccagtttgttg
actgaaactataccctgccatcgagattaccagactctgtatccaaaagaaagaacatct
tcaagaaagacacttttaagagtgctagatgagctagaggctctaaagccgacgttcctg
cgtcaagtgaatgaactggaaaaacgtcaagtgaaagctcaaccttatcaacttgagtct
tccgaaattactccaactgtatcatcaaggaattctttagggcggcccgcattggacaat
aaagcatcttcaggctatgacaataagtgggttgtaagcagcacaacttctaaatggaag
cagaacaatgatcaccctcaagtttcatcattgaattccatagacttgcagttccaaaag
ctatctctctctttacctcttccaaagcaagaaacactgtctaggcactcccttttaggc
ccaaatggtcttcatggccaatggcatggacctagtgctgagataaaggtgaactatcca
accaatacttatttggattcagatgatatgtcaagccttaaacaggttggacactatgat
cgtattgcgttcaaggatgctgactcaaaagtggataatcctaccatggaatcagttctc
tcattggatgatggtagatggtcgcagcctactgaggatgccagctcattttatgatgat
gtgaggaatgataatctttcatcaaatattattcatcaaccttctccccctcctgtcctt
gcccaagtgcaacaagagtatcggccaatttctccctccagagttgctgatccaagacct
gggccagttaaaccccaggatgggatgactggttctaatgcttatcaacatctgcatatt
ccagtaaggatgatggaagatttcttaaggttagcaaaagctaatacaacaaaaaattta
gaaacatgtggtgttcttgctggttcactgaagaacagagtatttcatatcactaccctt
ataattccaaagcaagaatcaacatcagattcttgccagacattgaatgaagaagaaata
tttgaggttcaggacaaactctctctttttcctcttggatggattcatacccatccatct
caaacatgttttatgtcatcagttgatctgcacacacattactcctatcagattatgttg
ccagaggcaattgcaatcgtcatggctcctaccgatgaatccagtcctcatggtatcttt
catttgtctgatcccggtggtgtatccgtaattcgaaactgtcaacagcgcggtttccac
ccgcatgaagaagctgaagatggaagccccatctatgaacactgttctcatgtgtatatg
aatgcaaatttgaagtttgatgtagtagatcttcgatga
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