Ipomoea triloba (trilobed morning glory): 116030628
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Entry
116030628 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116030628
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116030628
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116030628
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116030628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-RING_16
zf-UDP
TPR_MLP1_2
RINGv
TPR_COPA_B
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
116030628
NCBI-ProteinID:
XP_031128795
LinkDB
All DBs
Position
9:17579984..17584683
Genome browser
AA seq
651 aa
AA seq
DB search
MVGGENENAKTICSICFEDLKPIVEDLQSISICGHVFHELCLQQWFEYCKNGKKTCPVCK
QACKEKNVGRLYFQSVGETTEASFTQKLRDCEQNPEELRREVKRLQGRVFGLDSALEKHQ
KDLKDITEELLACKEQVKIEVTLKNEALKQSGMAQNLLYVKSKDLERSNSECTRLQERNL
SLAKELAALKLVCDLNLEEEDVLKFASLGNEANSKETIDVLKRSLVIRNKSYKELMVKCN
SLGRGEARCLSKLEKAKAKINKLKARVQELETAVEAKENEALRTLRTSKRTFEVDAADAF
GAEPKFKRCSYEDQNKRHLESRVDLDQGNNIHTDLLCSRKKEKLKVKDSTRRVPSEDTVA
CSLQENREFSFLKDKDIHETSTCGNEGLYEHLMPTTSNKTTLLDCHLSTVNASMRTISGI
QVPQVENKEEMPSSRNSIKNSKYILPETNDANDDDLVLLGDTTLAQPSFRKRKETPSILA
GPDISLAAEKEETPSSRSSNKNNNYILPKTNGANDDDLVLLGDTNLAQPAFHIRKETSSS
ILAEPGDRCFSGGLLGPDGTNWHLGKWCKKVQNKGSTPAFQGSTTVAGDLIAVGADGRGG
RVKVLRSSNHKTLDNNNASASAKRIKYGVKASSMQSQGCLQIEHFFSKAGQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaggcgagaatgagaacgcgaagaccatttgctcaatttgcttcgaagatctt
aaacctattgtcgaagatctccaatcgatttctatctgtggtcacgtctttcacgagctc
tgtcttcagcaatggttcgaatattgcaagaatggaaagaagacttgtcctgtatgcaaa
caggcctgtaaggagaagaatgtgggtcggctttattttcagtcagttggtgaaaccact
gaagcaagcttcacccagaaactgcgtgactgcgagcagaatccagaagagttgcggaga
gaggtcaagagattgcaggggagagttttcggactggattctgctctggagaaacaccag
aaagatctcaaagatattactgaagagctgttagcatgcaaggaacaggtcaagattgaa
gtgactctgaaaaatgaggctctgaaacagagtggtatggctcagaacttgctttatgtg
aaatctaaggacctggaaaggtcaaattcagaatgcacaaggctgcaggaaaggaacctc
tcactggccaaggaacttgcagcactcaagttggtctgtgatttgaacttggaggaagaa
gatgtcctaaagtttgcttcattaggtaatgaggccaacagtaaagagacaattgatgtc
ttgaaaaggtcattggtcatccgtaacaagagttacaaagaattgatggtgaagtgcaat
tctcttggaagaggagaagcgcgttgtcttagtaaacttgagaaggccaaagccaagata
aataaactgaaagcaagggttcaggaactcgagacagctgtcgaagcaaaagaaaatgaa
gcgttgagaactttaaggacttccaagaggacttttgaggtagatgcagctgatgctttt
ggtgcagaacccaaatttaagaggtgctcatatgaggatcaaaataagcggcatcttgag
tcaagggttgatttggatcaaggcaataacatccatactgatttactttgttcaagaaag
aaggaaaaattgaaagtgaaggatagtacaagaagagttccaagtgaagatactgttgcc
tgcagtctgcaagagaatcgggaattttcttttcttaaagataaagatatacatgagact
tctacttgtggaaatgaaggcctgtacgaacacttgatgcccacaactagtaacaaaaca
actctccttgattgccatttgtcaacagtaaatgcttccatgaggacaataagtgggatt
caagtgccacaagtagaaaacaaggaagaaatgccaagctcaaggaattccattaagaac
agtaaatacatattacctgaaacaaatgatgccaatgatgatgatttggtgcttttaggt
gacacaactctagctcaaccctcttttcgcaaacgaaaagagactccgtccatccttgcc
ggaccagatatttcactagctgcagaaaaggaagaaactccaagctcaaggagttctaat
aagaacaataattacatattacctaaaacaaatggtgccaatgatgatgatttggtgctt
ttaggtgacacaaatctagctcaacctgcatttcatataagaaaagagacttcttcgtca
atccttgctgaaccaggggaccgttgcttctctggtgggttgctaggtcctgatggaacc
aattggcacttagggaaatggtgcaagaaggtacagaacaagggatcaacaccagcgttc
caaggatccactactgttgctggtgatttgattgctgttggagcagatggtagaggtggt
agggtcaaagttctacgatcctcgaaccacaagaccttggataataacaatgcatcagct
tcagctaagagaatcaagtatggagtgaaagcaagtagtatgcagtctcaagggtgcttg
cagatagaacacttctttagtaaggctggccaataa
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