Ipomoea triloba (trilobed morning glory): 116030860
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Entry
116030860 CDS
T07384
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116030860
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116030860
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116030860
NCBI-ProteinID:
XP_031129072
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Position
9:2997508..2999408
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AA seq
349 aa
AA seq
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MNVIDSCWRTKPNWASNRRALADCAVGFGKNAAGGKNGDMYMVTDPSDNPGNPKRGTLRY
GAIQTAPLWITFARDMVITLKNELMVNSYKTIDGRGAKVEIANGPCITIQGVTNIIIHGI
SMHDCKPGNSGTVRDTPTHAGRRRGSDGDAISIFSASNIWIDHCYLARAADGLIDVIHGS
TAITISNNYFTQHDKVMLFGHNDNNVEDKAMKVTVAFNHFGPGLIERMPRVRLGYAHVAN
NRYTGWLMYAIGGSANPTIFSEGNYFMAPNRPDSKQVTKREVKKGWSNWKWRSSKDKFLN
GAYFIPSGYGSCAPYYTKSQSFPVADGSRVPALTADAGPLRCSSYSSKC
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcatagactcctgctggcgcaccaagccgaactgggcctccaaccgccgcgca
ttggccgattgcgccgtcgggttcgggaaaaacgccgccggcgggaagaacggcgacatg
tatatggtcaccgacccgtcggataacccggggaacccgaagcggggcacgcttaggtac
ggcgctattcaaacggcgccgttgtggattacgtttgcgagggatatggtgattacgctg
aagaatgagcttatggtgaatagctataagaccattgatgggagaggggcgaaagtggag
attgctaatgggccttgcattacgattcaaggggtgaccaatataatcatacatggaatt
agtatgcacgattgtaagcccgggaattccggcacggtgagggatactcccacgcatgcc
ggccgccgtcgcggctccgacggcgacgccatttccatctttagtgcctccaacatttgg
attgatcattgctacctcgcacgtgccgccgacggcctcattgacgtcattcatggctcc
accgccatcaccatttctaacaactatttcactcaacacgacaaagttatgttgtttggg
cataacgataacaacgtagaagacaaagctatgaaagttacagtggcgttcaatcatttt
ggccctggtttaattgaaagaatgcctagggtgagactaggttatgctcatgttgctaac
aatagatacactggatggttgatgtatgcaattggtgggagtgcaaaccctaccattttc
agtgaagggaactactttatggcaccgaatagacccgattcgaagcaagttacaaagagg
gaggtaaagaaagggtggtcgaactggaaatggaggtcgtccaaggataaatttctaaat
ggggcatacttcataccttccggatatggaagctgcgcgccgtactacaccaaatctcag
tcgtttccggtggcggacgggtctagggttccggcgctcacggcggacgcaggcccgctc
agatgctcctcctactcctccaaatgttga
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