Ipomoea triloba (trilobed morning glory): 116030873
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Entry
116030873 CDS
T07384
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116030873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116030873
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116030873
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
116030873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
116030873
NCBI-ProteinID:
XP_031129084
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All DBs
Position
9:1291317..1297889
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AA seq
1124 aa
AA seq
DB search
MEIAPAAPASNDGGSGIATAAASSSSSSSSFSVDAIKGTTGTASSASSSASTMLPDAANK
NSGATGSAFKYDDDEEEEDVCRICRNPGDADNPLRYPCACSGSIKYVHQDCLLQWLNHSN
ARQCEVCKHAFSFSPVYAENAPARLPFQEFIVGMAMKACHVLQFFLRLSFVLSVWLLIIP
FITFWIWRLAFVRSFGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFR
HLRELGGQDADREDEGDRNAVQARRPPGQANRNFAGEGNGEDANGAQGIAGAGQIVRRNA
ENAAARWEMQAAHLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASN
MIFLGVVIFVPFSLGRIILYYLTWLLSSATSPVLSTVMPLTETALSLANITLKSAMTAVA
NLTSDNQENSLLGQVAEMMKSNATGLNEVSGNLSTVVSADLLKGASIGASRLSDVTTLAV
GYMFIFSLVFFYLGVVALIRYTRGEPLTLGRFYGIASIAETIPSLFRQFVAAMRHLMTMI
KVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSITQRVEFFSISPLASSLIHWVVGIVYML
QISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVM
LVFLPVKLAMRMAPTIFPLDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRY
WFTAVGWSLGLTEFLLPRPEDNSGQENGNGDQGRQNRVHGQVGGQDRALVGLAPDDLNRI
RHATTINGNSVDEDDGDEQTDSDRYGFVLRIVLLLVVAWMTLLIFNSALIIVPISLGRAL
FNSLPLLPITHGIKCNDLYAFVIGSYAIWTALAGARYCVDHIRSRSATVLIALIWKWCGI
VLKSSALLSIWILVIPVLIGLLFELLVIVPMRVPIDESPVFLLYQDWALGLIFLKIWTRL
VMLDQMMPLVDDSWRTKFERVRQDGFSRLQGFWVLREIVVPIIMKLLTALCVPYVLARGV
FPILGYPLVVNSAVYRFAWLGCLGFSLLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNY
GEDIVEKQNEEGVSQEAQNAPLIQDDQQAADIGIRQRNAFRQDT
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcaccggcggcgccagcgtctaacgacggtggaagcgggattgccaccgcc
gctgcttcctcctcctcctcctcctcttccttctcggtcgatgcaatcaaggggactacc
ggcaccgcttcttctgcgtcttcctccgcctcaacgatgctgccggacgcggcgaataaa
aatagtggcgctactggttcagctttcaagtatgacgacgacgaagaggaggaggacgtt
tgccggatctgtcggaaccccggtgacgccgataaccctctccgttatccctgtgcgtgc
agcggcagtattaaatatgtccaccaggattgccttcttcagtggctcaatcacagcaac
gctcgccaatgcgaggtatgcaaacatgccttttctttctctcccgtttatgctgagaat
gctccagccaggcttccttttcaggaatttattgttgggatggctatgaaggcatgccat
gtcctgcaatttttcctgcgccttagctttgtactttctgtttggcttctaatcattcct
ttcataacattctggatatggcgtttggcgtttgttagaagttttggtgaagctcagagg
ctattcttaagtcatatatctacgacagttattcttactgactgcctgcatgggttcctc
ctctctgcaagcattgtctttatttttcttggggcaacttcactgagggattacttcaga
catttacgagaacttgggggacaggatgctgacagggaagatgaaggtgatagaaatgca
gtccaagctcgaagacctcctggtcaagctaacagaaattttgctggtgaaggaaatggt
gaagatgccaatggagctcaaggaattgcaggagctggtcagattgtcagaagaaatgca
gagaatgctgctgcccgttgggagatgcaggcagcacatcttgaggctcatgttgaacag
atgtttgatggtttagatgatgctgatggtgcggaggatgtaccttttgatgagcttgtt
ggcatgcaggggcctgtctttcatctggttgaaaatgcattcactgtacttgctagcaat
atgatattccttggggttgtaattttcgtccctttttcactgggacggattatactctat
tatttgacatggctcttgtcttctgccaccagtccagtattgtcaactgtcatgcctctt
actgaaacagcactttccttggctaatatcactttaaagagtgctatgactgctgttgca
aacttgacgtctgacaaccaggagaatagtttgcttggccaagtagcagaaatgatgaaa
tcaaatgccacaggattaaacgaagtgtcaggcaacctcagtacagtagtttcagctgat
cttttgaaaggggcatctattggggcatcgcgactttctgatgttaccactcttgctgtt
ggatatatgtttatattttctctggtctttttctatcttggagttgttgctttaattcgg
tacactagaggagaacctttgacattggggagattttatggaattgcttccattgcagaa
actattccttccctattcaggcaatttgtggcagcaatgagacatctgatgactatgatc
aaggttgcttttcttctggtaattgaacttggggtcttccctttgatgtgtggatggtgg
ctggatgtttgtaccataagaatgtttgggaagtcaatcacacaaagagttgagttcttt
tcaatttctccattggcaagctcattgattcattgggttgtagggatcgtctacatgcta
caaataagcatctttgttagtcttctccgaggggttttgcgtaatggggttctctacttc
cttcgagatccagctgatccgaactataatccattcagggatctcattgatgatcctgtg
cataagcatgctcggagagttcttctatctgtggctgtttatggcagtttgattgtgatg
cttgtatttttacctgtaaaacttgccatgcgaatggctcccactatttttcctcttgat
atttctgtgtcagatccatttactgaaatccctgctgacatgcttctctttcaaatctgc
attccttttgccattgagcattttaaattgcggacaacaatcaagtctcttctccgatat
tggtttactgctgtgggttggtcccttggcttaactgagttcttattgcctagacctgag
gataatagtgggcaagagaatggaaatggtgaccaaggcaggcagaacagggtgcatggg
caggtaggtggacaagatcgggcacttgtgggacttgctcctgatgatttgaacagaatt
agacatgccacaacaattaatggcaattctgttgatgaggatgatggtgatgaacaaact
gattcagacaggtatggctttgtgcttcggattgtgttgctgctggttgtggcttggatg
actttgcttatattcaattctgccctgataattgtcccaatttcacttggacgagcactc
ttcaattcccttccacttctgccaattacgcatggaatcaagtgcaatgatttatatgca
tttgttattggaagttatgctatttggactgccttagctggagctaggtactgtgtcgac
cacattaggtcaagaagtgctacagttcttattgccctaatttggaaatggtgtggcatt
gtcctaaagagttctgcattgctctcaatatggatcttagtcatcccggtattaattgga
ctgctctttgaacttttggtgattgtgccaatgcgagtgcctatagatgaaagtccagtt
ttcctcttgtatcaggactgggctcttgggctaatctttctgaagatctggactaggctg
gttatgctggatcagatgatgcctttggtggatgacagttggcgaacaaaatttgagagg
gtgaggcaagatggattctctcggctgcagggattttgggtcctgcgtgagattgttgtt
ccgattatcatgaagcttcttacagcactgtgtgttccatatgtcttagcaaggggagtt
ttcccaatacttggttaccctttggtggttaactctgctgtttatcggtttgcttggttg
ggatgccttggctttagtctgttgtggttctgtgccaagcggttccatgtatggtttacc
aacctccataattcaatcagggatgaccgctatttgattggtcgcaggcttcacaattat
ggtgaagatattgtagagaagcagaatgaagagggggtgtcccaagaagcacaaaatgct
ccattgattcaagatgaccagcaggctgcagacataggtattagacagagaaatgcattc
aggcaagatacttaa
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