Ipomoea triloba (trilobed morning glory): 116030890
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Entry
116030890 CDS
T07384
Name
(RefSeq) exopolygalacturonase clone GBGA483-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Module
itr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116030890
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
116030890
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
FAM167
Motif
Other DBs
NCBI-GeneID:
116030890
NCBI-ProteinID:
XP_031129113
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Position
9:complement(4993858..4997060)
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AA seq
396 aa
AA seq
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MKSILIQAAWFCILLASFVTGSHAAIFDVKKFGAKADGKSDDSKAFLGAWGAACKAAGAN
TITADGKYMAGPIKFQGPCKGAITIEAHKMILTALPDPYAFKGHAWVTFSSVHGLTINGG
TFDGNGATAWKLPDCGKKGNICRLPANLQFNVVTGLKIIGLTNKNSKQFHMTMGGCKDVT
IQNYTVNTPGDAPNTDGVHIGESSKVSILGASIKTGDDCVSLGDGVQDVHVEKVTCGPGH
GLAIGSLGKYPNEKPVLGVTVKNCTLTGTTNGARIKTWPGSPVGSASNMHFEDIIMNNVT
NPILIDQQYCPWNQCKAGVPSKVKLSGIGFKNIKGTSSSKVAMTIHCSPAVPCQGVLMND
INLVYKGKDGPAVSSCTNVKPSITGKVVPTACSTHK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccatactcattcaagctgcatggttctgcattttgctggcgtcttttgtaaca
ggctcgcatgccgccattttcgacgttaagaaatttggcgccaaggccgatggaaaatca
gatgacagtaaggcgtttctgggtgcgtggggcgcagcatgcaaagcagcgggagcgaac
acgattacggcggacggcaaatacatggccgggccgattaagtttcagggaccttgcaaa
ggtgccatcaccattgaagctcataagatgattctgactgctttaccggatccctatgcg
ttcaaaggccacgcatgggtcaccttctccagtgtccacggactaactatcaacggcggc
actttcgacggcaatggcgccaccgcctggaagctacccgactgtggtaaaaaaggcaat
atctgtcgtcttcccgctaatctgcaatttaatgtggtaacgggtttgaaaatcatcgga
cttacgaataagaacagcaagcaattccacatgacgatggggggttgcaaggacgtgaca
atacagaactacaccgtcaacacgccgggggacgccccgaacacggacggagtccacatc
ggcgaaagcagcaaagtaagcatcctcggcgcgtccataaaaaccggcgatgattgcgtg
tcattgggcgacggcgtccaggatgtgcacgtggagaaggtgacctgcggtcccggccac
gggctggccatcggaagcctgggcaagtaccccaacgagaaacccgtcttgggagtcacc
gtcaagaactgcaccctcaccggtacaaccaacggcgccaggatcaagacgtggcccggc
tccccggtcggcagcgccagcaacatgcacttcgaagacatcatcatgaacaacgtcacc
aatcctatcctcatcgatcaacaatattgcccatggaatcaatgcaaagccggggttccg
tcgaaagtaaagctgagcggcatcggattcaagaacataaaggggacgtcgtcgagcaaa
gtggcgatgacgatacattgcagcccggcggtgccgtgccagggtgtactgatgaacgat
atcaatttggtttacaaaggaaaggatggaccggcagtctcttcatgcaccaacgtcaag
ccttccatcaccggaaaagtcgtcccaacggcgtgctctacgcataagtag
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