Ipomoea triloba (trilobed morning glory): 116030907
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Entry
116030907 CDS
T07384
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03082
ATP-dependent chromatin remodeling
itr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116030907
03083 Polycomb repressive complex
116030907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116030907
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116030907
Histone modification proteins
HAT complexes
HATB complex
116030907
HDAC complexes
Sin3A-HDAC complex
116030907
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116030907
PRC2.2
116030907
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116030907
Heterochromatin formation proteins
Other heterochromatin formation proteins
116030907
Chromatin remodeling factors
NuRD complex
116030907
NuRF complex
116030907
NuRF complex (fruit fly)
116030907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
116030907
NCBI-ProteinID:
XP_031129139
LinkDB
All DBs
Position
1:1509047..1512493
Genome browser
AA seq
397 aa
AA seq
DB search
MSSGWPPTRSEILEAYMYWKLYIPNLYDFIYSNNLKSPSLTVEWLPGQEIPEGELYRFQK
LILGTRAAENEQNRLLLFQVKLPNYDDEGEPRSSVGNGKIKRVQQINHDGVVNRARYMPQ
NPSIIATKTGSTEVFIFDCAKHPSNPLGKGVCKPDLRLTGHKDKGHALSWSPFEQGHLLS
GSEDGKVCLWDVNATPKDKKLNSMRIFDIDQHGSVEDVAWHTTEKNLFGSVGEDKRVCIW
DIRTPMVGLYNGGAHTAKVNSLAFNPISGWVIATGSSDRKVILFDLRMLSSAHRLHTLKW
QAQEEVAHVRWNHKHENILASSCTGRKLVVWDLNRIGRAQTPEDAEEGPPELLFLHGGHL
DSITDFSWNPSCEWAVASVAVDKNLQIWEMKERIYED
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagttccggttggccgccaaccaggagcgaaatactcgaggcgtacatgtactggaag
ctctacattccaaatctgtacgattttatctacagtaacaacctcaagtcgccgtcgctc
accgtcgaatggctccccggccaggagattccggagggggagctttatcgcttccagaaa
ctgatcctcggaactcgcgcggcagagaatgagcagaacaggcttttgctgtttcaggtt
aagctgcctaactacgatgatgaaggcgaacctagatcttctgttgggaatgggaagata
aaaagagtgcagcaaataaatcatgatggggtagttaaccgggctcgttacatgccacaa
aaccctagtattattgctaccaagacaggcagtactgaggttttcatttttgattgtgcc
aaacatccatcaaatcctctcggaaagggtgtttgcaagcctgatttgaggttaactggt
cacaaagataaagggcatgccttgtcctggagtccatttgagcagggtcatttgttaagt
ggctcagaggatggtaaagtttgcttgtgggatgttaatgccactccgaaggataagaaa
cttaactctatgcgtatatttgatattgatcagcatggaagtgttgaggatgtagcttgg
catacaacggagaagaatttatttggttcagttggagaagataaacgtgtatgtatatgg
gatatacgcactccaatggttgggctttataatggtggtgctcatactgctaaggttaac
tccctggcatttaatcctattagtggatgggttatagcaactggatcttctgataggaaa
gtcatattgtttgatctgcgcatgctttcttctgcccaccgtctccataccttgaaatgg
caagcccaggaggaggttgcccatgttaggtggaatcacaagcatgagaatattttggct
tcaagttgtactggcaggaagcttgttgtttgggatcttaacaggattggccgtgcacaa
actcctgaggacgctgaagaaggacccccggagttgctctttcttcacggtggccacttg
gatagtattacagacttctcatggaacccaagctgcgaatgggctgtagccagtgtagct
gtggacaagaacctacaaatatgggagatgaaagaacgcatttatgaagattga
DBGET
integrated database retrieval system
