Ipomoea triloba (trilobed morning glory): 116030944
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Entry
116030944 CDS
T07384
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03082
ATP-dependent chromatin remodeling
itr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116030944
03083 Polycomb repressive complex
116030944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116030944
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116030944
Histone modification proteins
HAT complexes
HATB complex
116030944
HDAC complexes
Sin3A-HDAC complex
116030944
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116030944
PRC2.2
116030944
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116030944
Heterochromatin formation proteins
Other heterochromatin formation proteins
116030944
Chromatin remodeling factors
NuRD complex
116030944
NuRF complex
116030944
NuRF complex (fruit fly)
116030944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
Beta-prop_EML_2
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
EIF3I
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
NBCH_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
116030944
NCBI-ProteinID:
XP_031129187
LinkDB
All DBs
Position
1:1523537..1526437
Genome browser
AA seq
396 aa
AA seq
DB search
MSSSVPLPTESQLRSMNDFWNNYAGCLYHMFINHSLDWPTPTVEWLPDGEEPVRSHYTVQ
KLIVGTRAAGNAQNSLLLAQVRLPREDKKPKKKSSSSVELGKIEIVQQINHDGVVNRARY
MPQNPSIVATKTGSAELFMFDCTKHPSNPPEEGVCNPDLRLTGHKDKGNALSWSPLKQGY
LLSGSDDGQICIWDVNATPNDKALEAMHIFDIQHGCAKDVAWHMKNENLFGSVGEDNYLR
IWDIRTPVIKLNQSVLSHEAMVNSLAFNPINGWVVATGSSDRKVILFDLRMISSSLQTLD
CDREEVDNVRWSHKRENILASSSGKKLLVWDTSRIGRAQTSDEEKAGPPEFVFIHFAHLD
SITDFSWSPTGPTNDLSIASVANDSSIHLWRMKEEK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttctgttccgctgccaaccgagagccaattacgctcgatgaacgacttttgg
aacaactacgctggatgtctgtaccatatgttcatcaatcacagcctcgactggcccacg
cccaccgtcgaatggctccccgacggggaggagccggtgcggtcgcattatactgtccag
aaactgatcgtcggaactcgcgcggcagggaatgcacagaacagccttttgctcgctcag
gttaggctgcctcgcgaggataagaagccaaagaaaaaatccagttcttctgttgagctt
gggaagatagaaatagtgcagcaaataaatcatgatggggtagttaaccgggctcgctac
atgccacaaaacccaagtattgttgctaccaagacaggaagtgctgagcttttcatgttt
gattgtaccaaacatccatcgaaccctcccgaggagggtgtttgcaaccctgatttgagg
ttaactggtcacaaagataaagggaatgccttgtcctggagtccactgaagcagggttat
ttgttaagtggctcagatgatggtcaaatttgcatatgggatgttaacgccactccaaac
gataaggcacttgaggccatgcatatatttgatattcaacatggatgtgctaaggatgta
gcttggcatatgaagaatgagaacctatttggttctgttggtgaagataactatctgcgt
atatgggatatacgcactccagtgatcaagcttaatcaatctgtactttctcatgaagct
atggttaactccctggcatttaatcctattaatggatgggttgtagcaactggatcttct
gataggaaagtcatattgtttgatctgcgcatgatttcttcttctctccagaccttggat
tgtgacagggaggaggttgacaatgttaggtggagtcacaagcgtgagaatattttagct
tcaagtagtggcaagaagcttcttgtttgggatactagcaggattggccgcgcacaaacc
agtgatgaggaaaaagcaggacccccggagtttgtctttattcactttgcccacttggat
agcattacagacttctcatggagcccaaccggcccaaccaacgatttgagtatcgccagt
gtagccaacgacagcagtatacacttatggaggatgaaagaagagaaatga
DBGET
integrated database retrieval system
