Ipomoea triloba (trilobed morning glory): 116030949
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Entry
116030949 CDS
T07384
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03082
ATP-dependent chromatin remodeling
itr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116030949
03083 Polycomb repressive complex
116030949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116030949
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116030949
Histone modification proteins
HAT complexes
HATB complex
116030949
HDAC complexes
Sin3A-HDAC complex
116030949
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116030949
PRC2.2
116030949
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116030949
Heterochromatin formation proteins
Other heterochromatin formation proteins
116030949
Chromatin remodeling factors
NuRD complex
116030949
NuRF complex
116030949
NuRF complex (fruit fly)
116030949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_RIG_2nd
CAF1C_H4-bd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_RFWD3
EIF3I
WDR55
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
116030949
NCBI-ProteinID:
XP_031129199
LinkDB
All DBs
Position
1:1529581..1532517
Genome browser
AA seq
406 aa
AA seq
DB search
MSSGSPPTRRELLAMHEFWKSNAQNLYDMVVTYNSDWPTPTVEWLPDGEEPEGESYTVQK
LIVGTRAPENEQNSLLLLQVRLPRDDWEGEQFSSSVEMGKVEIVQRINHDGVVNRARYMP
QNPSIVATKTGSAELFMFDCTKHPSNPPEEGVCNPDLRLTGHKDKGNALSWSPLKQGYLL
SGSDDGQICIWDVNATPNDKTLEAMHIFDIQHGCAKDVAWHMKNENLFGSVGEDNYLRIW
DIRTPVIKLNQSVLSHEAMVNSLAFNPINGWVVATGSSDRKVILFDLRMISSSLQTLERF
SEPCDREEVDHVRWNHKRENILASSCAGKKLLVWDISRIGRIQTSEEEKAGPPELIFLHF
GHMDSITDFSWSPTYDSAIASAANDNSLQLWRMLEDEDDDDDEKAP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagttccggttcgccgccaaccaggagggaattactcgcgatgcacgagttttggaaa
agcaacgctcaaaatctatacgatatggtcgtcacttacaactccgactggccgacgccc
accgtcgaatggctccctgacggggaggagccggagggggagtcttatactgtccagaaa
ctgatcgtcggaactcgcgcgccagagaatgaacagaacagccttttgctccttcaggtt
aggctgcctcgcgacgattgggagggtgaacaattcagttcttctgttgagatggggaag
gtagaaatagtgcagcgaataaatcatgatggggtagttaaccgggctcgttacatgcca
caaaacccaagtattgttgctaccaagacaggcagtgctgagcttttcatgtttgattgt
accaaacatccatcgaaccctcccgaggagggtgtttgcaaccctgatttgaggttaact
ggtcacaaagataaagggaatgccttgtcctggagtccacttaagcagggttatttgtta
agtggctcagatgatggtcaaatttgcatatgggatgttaatgccactccaaacgataag
acacttgaggccatgcatatatttgatattcaacatggatgtgctaaggatgtagcttgg
catatgaagaatgagaacttattcggttcagttggagaagataactatctacgtatatgg
gatatacgcactccagtgatcaagcttaatcaatctgtactttctcatgaagctatggtt
aactccctggcatttaatcctattaatggatgggttgtagcaactggatcttctgatagg
aaagtcatattgtttgatctgcgcatgatttcttcttccctccaaaccttggaacgcttt
tctgaaccttgtgacagggaggaggttgatcatgttaggtggaatcacaagcgtgaaaat
attttagcttcaagttgtgctggcaagaagcttcttgtttgggatattagcaggattggc
cgcatacaaaccagtgaggaggaaaaagcaggacccccggagttgatctttcttcacttt
ggccacatggatagcattacagacttctcttggagcccaacctacgactccgctatcgcc
agtgcagccaatgacaacagtctacagttatggcggatgctagaagatgaagatgatgat
gatgatgagaaggccccatag
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integrated database retrieval system
