Ipomoea triloba (trilobed morning glory): 116030969
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Entry
116030969 CDS
T07384
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116030969
Membrane trafficking [BR:
itr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116030969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
116030969
NCBI-ProteinID:
XP_031129234
LinkDB
All DBs
Position
9:complement(31613141..31633744)
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AA seq
1827 aa
AA seq
DB search
MESSSSNGYRFRRIPRQTFAAVLNLDPLLDEKLEQWPHLNELVQCYRTDWVKDDSKYGHY
ESIGPTSFQSQIFEGPDTDIETEMHLGNARQTKIDDSFEGENPSTSGAQLTEASLSDLSN
AKVSKHFGESPLPAYEPVFDWENERSMIFGQRIPEAHMSQYTSGLKIAVRVLSLSFQAGL
AEPFYGTICLYNRERREKLSEDFLFRILPAEMQDASTSYERRAVFHLDAPSASVCLLIQL
EKPATEEGGVTPSVYSRKESVHLTEREKQKLQVWSRIMPYRESFAWAIIPLFDSGLSAAV
GGSNSPSSPLSTSISGSSYQEGGVEPIAKITSDGKLGYSSGNSIVVEVSNLNKVKEGYTE
DSLQDPKRKVHKPVKGVLKLEIEKLQTNSVDFEHMESGSVTFDSVENGPLNAFSKSNSFE
RKELTRNGSVGNENPDVASADFEAFDFRTTTRNEPFLQLFHCLYVYPLTVSMSRKRNMFI
RIELKKDDADISHPPLEAMHPRAPGASLQKWAHTQVAVGTRVASYHDEIKVSLPAIWTPM
HHLLFTFYHVDLQTKLEAPKPVVVGYASLPLSTHAQLKSEISLPVMKELVPHYLQDSGKE
RLDYIEDGKSIFKLRLRLCSSLYPISERIRDLFLEYDRHTLRTSPPWGSELLEAINSLKN
VDSTALLQFLYPILNMLLHLISNGGETLQVAAFRAMVNILTRVQQESVDEAERNVFLVNY
VDYAFDDFDDRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMAL
EQARLFYHNIPSGEDVPPMQLKEGVFRCIVQLYDCLLTEVHERCKKGLSLAKQLNSSLAF
FCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLTFLQILCDHDLFVEMPGRDPSD
RNYLSSILIQEIFLTWDHEDLSMRAKAARILVVLMCKHEFDVRYQKPEDKLYIAQLYFPL
VGQVLDEMPVFYNLAAIEKREVLVIFLQIVRNLDDSSLVKAWQQSIARTRLFFKLLEECL
MHFEHRKPTDGILVASSSRSVVGEGPASPKYSDRLSPAINQYLSDAARQEVRQQGTPENG
YLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENVSAA
VSLQVLEVTDKFSRTAASHSIATDYGKLDCITSIFMNVFSRNQPLSFWKALFPVFNSVFE
LHGATLMARENDRFLKQIAFHLLRLAVFRNDNIRKKAVVGLQILIRSSFSCFTQTARLRV
MLTITLSELMSEVQVTQMKSDGTLEESGEARRLRKSLEEMADESKSLSLLVECGLPENAL
VASPEGLGENRWSWLEVKHLSDSLLMALDASLEHALMASVMNVDRYAAAESFYKLAMAFA
PVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVSRNDGVWSKDHVSSLRKI
CPMVSSEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILELVIPV
YKSRKAYGQLAKCHTMLTNIYESILEQESSPIPFTDATYYRVGFYGEKFGKLDKKEYVYR
EPRDVRLGDIMEKLSHIYESRMDGTTLHIIPDSRQVKAEELQAGVCYLQITAVDPVMEDE
DLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPAL
VNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSV
AVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQD
FHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcttcgtcaaatggatataggtttcggagaattccacgccagacctttgcg
gctgttctgaatttagacccgctgcttgatgaaaagttggagcagtggccccatttaaat
gaacttgttcaatgctatagaactgattgggtaaaagatgatagtaagtatggtcattat
gagagcattggccctacttcatttcagagtcagatatttgaaggtcctgatacagatatt
gaaacagagatgcatcttggcaatgcaaggcaaactaagattgatgattcttttgaggga
gaaaacccaagtacatcaggggcacagttgactgaggctagcttgtctgatttgtcaaat
gccaaagtctctaagcattttggtgaatctcctttgcctgcttatgaaccagtttttgac
tgggaaaatgaaaggtcaatgatttttgggcagaggattccagaagctcatatgtcccaa
tacactagtggactaaagattgctgtcagggttctatccttgtccttccaagcaggatta
gctgagccgttttatgggacaatttgtttatataatagggagagaagagaaaaactttcc
gaagattttcttttccgaatattgccagctgaaatgcaggatgcaagcacttcttatgaa
cgacgtgctgtttttcatctagatgccccatcagcatcagtttgtctgttaatccaactg
gaaaaacctgccactgaagaaggcggggtgaccccctctgtatattcacgaaaagaatca
gttcatctgactgagagagagaaacagaaattacaagtatggtctcgcatcatgccttac
agagagtcttttgcctgggccatcatcccactatttgatagtggacttagtgctgctgtc
ggtgggtctaattcccctagcagtcccctttcaacaagcatttctggttctagttatcaa
gagggtggtgtggagccaattgctaagatcacatcagatggaaagcttggatattcaagt
ggaaactctattgttgttgaagtgtctaatttaaataaagttaaagaaggctacacagag
gattcactgcaggatcctaagcgaaaggttcacaaaccagttaaaggtgtgctgaaactg
gaaattgaaaaactgcaaactaattctgttgattttgaacacatggaaagtgggagtgtg
acctttgattctgttgaaaatggacctctaaatgccttttctaagtcaaattcctttgag
aggaaggagctaactagaaatggatcagttggcaatgaaaatccagatgttgcctctgct
gattttgaagcttttgactttcgcactacaacaaggaatgaaccgttcttgcagcttttt
cactgcctctatgtctatcccttgactgtaagcatgagtaggaaaaggaatatgtttata
cggattgaactcaaaaaggatgatgcggatatttctcatccacctcttgaggcaatgcat
cctagggcgccaggtgcatcacttcagaagtgggctcatacgcaggttgctgttggaact
agggttgccagctaccatgatgaaattaaagtttctctgcctgctatttggacaccaatg
catcaccttttgtttacattttatcatgttgaccttcaaacaaagcttgaagctccaaag
ccagtagtagttggatatgcatcacttccactatccactcatgctcagctcaaatctgag
atctccttaccggttatgaaggagttagttcctcattatctccaagacagtggcaaggag
aggttggattacatagaggatggcaagagtattttcaagctccgcttacgactatgttcc
tctttataccctatcagtgagcgaattagggatcttttccttgaatatgacaggcacact
cttcgaacaagtccaccgtggggatctgagcttcttgaggccattaacagtttgaagaat
gttgattctacagctttgcttcaatttctgtatccaattttaaatatgcttcttcatctc
ataagcaatggtggagaaacccttcaggttgcagccttcagagccatggttaacatttta
acaagggtgcagcaagagtcagttgatgaagctgaaagaaatgttttcctagtgaactac
gtagactatgcttttgacgattttgatgatcgccaaccaccagtttatcccggtctgtca
acagtctggggaagtttggctcggagtaaggcaaaaggctatcgtgttggacctgtatat
gatgatgtcttggcaatggcttggttttttctggagttaattgtcaagtcaatggctttg
gaacaggctcgattattctatcacaatattccatcaggtgaagatgtgcccccaatgcaa
ctgaaagaaggcgtttttaggtgtattgtacaattatatgattgccttttaacggaagtt
catgaacgttgcaagaagggtctaagcttagccaaacagttaaacagcagcctggctttc
ttttgttatgatctcttgtcaatcattgagcctcgccaagtttttgaactggtgtccttg
taccttgataagttctctggggtgtgtcaatcagtgctgcatgattgcaagctaacattt
ctccagatattatgcgatcatgatctctttgtggaaatgcctggaagggatccttcagat
aggaattacctatcatctatcttgattcaagagattttccttacttgggatcatgaagac
ttatcaatgcgggcaaaagcagctagaattttagtggtcctaatgtgtaagcatgagttt
gatgtccgctaccaaaagccagaagataagctatacattgcccagctatattttccactt
gttggccaggttctagatgagatgcctgtattctacaatctggccgcaattgaaaagcgt
gaagtcctcgtcatttttctgcagatagtacgcaacttggatgactcatcacttgttaaa
gcttggcagcaaagtattgctcgtaccagattgtttttcaaactcttggaagaatgtctt
atgcattttgagcatagaaaacccactgatggcatacttgtggccagtagctctcgtagt
gtggtgggggaaggccctgcatcaccaaagtattctgatagactttcacctgcaataaac
cagtacctgtctgacgctgcacgacaagaagtcagacagcagggaacacctgagaatggt
tatttgtggcaaagggttaattcacagctaagttcacctagtcagccatattctttaaga
gaagcacttgctcaagcccagtcctctcgaattggggcttcagcacaagcattaagggaa
tctttgcacccaatattaaggcaaaaactggaactttgggaggagaatgtaagtgcagct
gtcagcctacaagtgttggaagtcactgataaattttcaaggactgctgcttctcatagc
attgctactgattatggaaaacttgattgtatcacatccatatttatgaatgtcttctca
cgcaatcaaccactctctttctggaaagctctctttccagtgttcaacagtgtttttgaa
ctccatggggctactctcatggcaagggaaaatgaccgcttcttgaagcaaattgctttc
catctactacggcttgctgttttccgaaatgacaatattaggaaaaaggctgttgttggg
cttcagatacttattcgtagctccttctcttgctttacacaaacagcaagattgagagtc
atgttaactattacattgtcagagttgatgtctgaagtccaagtaacacagatgaagtca
gatggaacgcttgaagagagcggagaggcccgtcggcttcgaaaatcactggaggagatg
gctgatgaatctaagagcctcagcttattagtggagtgtgggcttccagaaaatgcactt
gttgcttctccagaaggattaggagaaaaccggtggtcctggttggaagtgaaacatctt
tctgacagtcttctaatggctcttgatgctagcctggaacatgcccttatggcatctgta
atgaatgtagacagatatgcagctgctgagagtttttacaaactagcaatggcatttgca
cctgtgccagatcttcacataatgtggttactgcatttatgtgatgcacatcaggagatg
cagtcttgggctgaagctgcacaatgtgctgttgctgttgcaggtgttgtgatgcaggcc
cttgtgagtaggaatgatggtgtgtggagcaaggatcatgtgagctcattacgcaaaatc
tgccccatggttagcagtgagatcacttctgaggcctcagctgctgaagtagaaggatat
ggtgcttcaaaactaactgtggattctgctgtcaaatatctgcagcttgcaaataagctt
ttttctcaagctgagctctaccatttctgtgcaagcattctagaacttgtaattccagta
tataaaagcagaaaggcttatggacagctagcaaagtgccacactatgctcactaacatc
tatgagtcaatcctagagcaggagtcaagtcctatacctttcacagatgcaacatactat
agagtaggattttatggtgaaaaatttgggaagctggataagaaagaatatgtgtataga
gagcctcgagatgtaaggttgggtgacataatggagaaacttagccatatatacgagtcg
agaatggatgggactactttgcatataatacccgactctagacaagttaaagcagaggag
ttgcaggctggagtgtgctacttgcagataactgcagttgatccagtgatggaagatgaa
gatcttggaagcagacgggaaagaatattctcactttcaactggaagtgttagagctcga
gtttttgatcgctttttgtttgatactccattcactaaaaatggaaagactcaaggaggg
ctggaagatcagtggaagcggcgcacagttctgcaaactgagggatctttccctgccctc
gttaaccggcttttggttatcaaatcagaatcacttgagttttccccagttgagaatgca
attgggatgattgaaacgcggacagctgcattacggaatgaacttgaagagcctcgcagt
tcggaaggtgaccaacttccccgtctgcagagcttacagaggatactccaaggctctgtt
gctgttcaagtgaacagtggagtccttagtgtttgtactgcatttctttctggggagcct
gcaacgagattgcgctcacaggagctgcagcaacttattgctgctcttctagaattcatg
gctgtatgcaagcgagctatacgagttcactttcggttgattggtgaagaagatcaagat
tttcacacacagctggtcaatggatttcagtctctcactgctgagttatctcactatatt
cccgcaattctttcggaactctaa
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