Ipomoea triloba (trilobed morning glory): 116030984
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Entry
116030984 CDS
T07384
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00730
Thiamine metabolism
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
116030984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116030984
Enzymes [BR:
itr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
116030984
Ribosome biogenesis [BR:
itr03009
]
Prokaryotic type
GTPases
116030984
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
AAA_16
nSTAND1
AAA_29
ABC_tran
SMC_N
AAA_23
AAA_21
ATP-synt_ab
IstB_IS21
AAA_22
GvpL_GvpF
Motif
Other DBs
NCBI-GeneID:
116030984
NCBI-ProteinID:
XP_031129259
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Position
9:31282773..31291035
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AA seq
501 aa
AA seq
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MKIASMSLLRPRVVPLLFSTFSASASRNTYLSSPFAIVLAARHHHQGSKNAPRKLQQPNK
NLLKARETIKQFSPLAPVLSSEDKTNLSQDQAVGMVAASQANFMRVIVQSLPSEVCSGSG
LVEGFTDAPGVGVELLCVVKAVLKKIKRRVLVGDKVLVGSIDWVDRRGMIENVFERKCEI
LDPPVANVDHLLVLFSMEQPKLEPFSLTRFLIEAESTGIPFTLALNKCELVPEETLAAWK
SRLRKWGYEPIFCSVESQRGIDTLLFIMREQTSVIVGPSGVGKSSLINAMRFNKRGAVGV
GEGDNCSNLILDSKWFEEQRVGEVSTRSGRGKHTTRNVSLLPLSEGGYLADTPGFCHPSL
MKVTKQSLAEHFPEIQKMLKEKEPAKCSFSNCLHLGEPGCLVGGDWERYPYYLQLLDEIK
IREEFQLRVVGTKRESDVRYKVGDKGVIQAEPRLEPKKHRRQSRKRLNQSVLDELDELDD
EDEETLDDDNPILRAMKQENS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcttcaatgtctcttctccggccacgtgtggtgccgcttctattttcaact
ttcagtgcctcggcctcacggaacacctacttatcttccccattcgccattgtcttggca
gctcgccatcaccaccaaggctctaagaatgctcctaggaaactacaacagccgaataag
aacctcctcaaggctcgtgagactatcaagcaattctcgcctctagctccggttctctcc
agcgaagataaaacaaatctctctcaggaccaagcagtgggaatggttgctgcttcacag
gctaatttcatgcgtgttatagtgcaatcattgccttcggaagtttgtagtggttctgga
ctggtagaaggtttcactgatgctccgggagttggagtggaactactatgtgtggtgaag
gcggtgttgaagaagatcaagaggagagtgttggttggggataaggttttagtaggttcg
attgattgggtggacagacggggaatgatagaaaatgtgtttgagaggaagtgcgagatt
ttggaccctcctgtggcgaacgtggatcatttgctagtgttgttttcaatggagcaaccg
aaacttgagcccttttctctcactaggttccttattgaggctgagtcaactggaattcct
tttactcttgcattgaacaagtgtgaacttgttcctgaagagacattggctgcatggaaa
tctaggcttcgtaaatggggttatgaacctatcttttgcagtgtggaatcacagcgtgga
attgatactttgctgttcattatgagagaacagacctcagtaattgttggccctagtggt
gttggaaaatccagtctcattaatgctatgagattcaataagcgtggtgctgttggtgtt
ggcgaaggagataactgttcaaacctaattctggatagcaaatggtttgaagaacaacgt
gttggtgaagtgtctacaagaagtggaagagggaaacataccactaggaatgtttcttta
cttccactatctgaaggagggtatctcgcagatactccaggattctgccatcctagtttg
atgaaagtgacaaagcaatctctcgcagaacattttcccgagatccaaaaaatgcttaaa
gaaaaagaaccagcaaagtgttctttcagcaactgcttacatcttggtgaaccggggtgc
cttgttggaggagactgggaaagatacccatactaccttcagttgcttgatgaaatcaaa
atcagagaggagtttcagcttagggtagtggggactaaacgagaaagtgatgtgaggtat
aaagtaggagacaaaggcgttatacaagctgaaccgcgcttagaacccaagaagcacagg
agacaatctcgtaagagactgaaccaatcagtcttagatgagttggatgaacttgatgat
gaggatgaagagacactggatgatgacaacccaatattgagagcaatgaagcaagaaaac
tcatag
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