Ipomoea triloba (trilobed morning glory): 116031357
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Entry
116031357 CDS
T07384
Name
(RefSeq) ras-related protein RABF2b-like
KO
K07887
Ras-related protein Rab-5A
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04144
Endocytosis
itr04145
Phagosome
itr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116031357
04145 Phagosome
116031357
04148 Efferocytosis
116031357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116031357
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116031357
04031 GTP-binding proteins [BR:
itr04031
]
116031357
Membrane trafficking [BR:
itr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
116031357
Endosome - Lysosome transport
116031357
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116031357
Exosomal proteins of other body fluids (saliva and urine)
116031357
Exosomal proteins of colorectal cancer cells
116031357
Exosomal proteins of bladder cancer cells
116031357
GTP-binding proteins [BR:
itr04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
116031357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
AAA_24
AAA_22
TsaE
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116031357
NCBI-ProteinID:
XP_031129395
LinkDB
All DBs
Position
10:complement(23716350..23720003)
Genome browser
AA seq
203 aa
AA seq
DB search
MATAGNKNMNAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTVAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAVIVYDITNQESFERAKKWVQELQAQGNQNMVMAL
AGNKADLLDARKVEPEEAQKYAEENGLFFMETSAKTATNVNDVFYEIAKKLPRLQPAPNP
SGMVLMDRSAQRATATTTTSCCG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccggaaacaagaacatgaacgccaagctggtgctcctaggagatgttgga
gctggaaaatctagtctggtattgcgttttgttaaaggacaatttattgaattccaggaa
tctactataggagctgcttttttctcacaaacagtggcagtgaatgatgcaactgtgaaa
tttgaaatatgggacacagcaggtcaagagaggtaccacagtttagctccaatgtactat
agaggagctgcagctgccgtaattgtgtatgacataacaaatcaagaatcctttgaacga
gctaaaaaatgggtccaggaacttcaggcacaaggtaaccagaacatggttatggcactt
gctggaaataaagcggacttgttagatgcaagaaaggttgaacctgaggaagcacaaaaa
tatgcagaggaaaatggccttttctttatggagacgtctgcaaaaactgcaaccaatgtc
aatgacgttttctatgaaatagcaaagaaactgccccgtctgcagcctgcaccaaatcca
tcgggcatggttcttatggatagatctgctcaaagagccaccgctactactaccacttct
tgttgcggttaa
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