KEGG   Ipomoea triloba (trilobed morning glory): 116031715
Entry
116031715         CDS       T07384                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03030  DNA replication
itr03410  Base excision repair
itr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116031715
   03410 Base excision repair
    116031715
   03450 Non-homologous end-joining
    116031715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:itr03032]
    116031715
   03400 DNA repair and recombination proteins [BR:itr03400]
    116031715
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:itr04147]
    116031715
DNA replication proteins [BR:itr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    116031715
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     116031715
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     116031715
Exosome [BR:itr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116031715
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 DUF3231 PM2_P3 HHH_2 HTH_78
Other DBs
NCBI-GeneID: 116031715
NCBI-ProteinID: XP_031129852
LinkDB
Position
10:20204204..20211014
AA seq 417 aa
MGIKGLMKLLADNTPRAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
TTSHLVGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSRREDATAGLAAAEESGN
AEDIEKFSKRTVKVTQQHNSDCKKLLTLMGVPVVEAPSEAEAQCAALCKSDQVYGVASED
MDSLTFGAPKFLRHLMDPSSKKIPVMEIEVGKVLEDLELTMDQFIDLCILCGCDYCDSIR
GIGPQTALKLVRQHGSLESILENINKERYQIPDEWPYQEARRLFKEPLVLTGDDQPEIKW
GPPDEEGLIEFLVDQNGFNKDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTSAPAKRKG
TKCVLVSPIPVTKFRMFSVQASFMRTQPRAFCSLIPPSLDMSSNYSMPFIRGVCYSI
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgggaatcaagggtttaatgaagctgttggcggacaatactccgagagccatgaaggag
cagaaattcgagagctattttggccgcaaaattgctatcgacgccagcatgagcatctat
cagtttcttattgtagtgggacgaagtgggactgagatgctcacaaatgaggctggcgaa
actactagtcacttggttgggatgttctctcggacgattaggcttttggaagccggaata
aagccagtctatgtttttgatgggaaacctccagatttgaagaaacaggagcttgcaaag
cgttattcaagaagggaagatgctacagctggattagctgcggctgaagagagtggcaac
gcggaggatatcgagaaatttagtaaaagaactgttaaggtcacacagcagcacaacagt
gactgcaaaaaacttcttacactgatgggagtgcctgttgttgaggctccttctgaagca
gaagctcaatgtgctgcactatgcaagtccgatcaggtttatggtgtggcctcagaagat
atggattccttaacctttggagctccaaaatttcttcgccatttaatggatcctagctcc
aaaaagatccctgtaatggaaattgaagttggaaaggtactagaggacctggaactcaca
atggatcaattcattgacctgtgcattctgtgtgggtgtgattattgtgacagcattcga
ggtattgggccacaaactgctctgaagcttgttcgccaacatggctcattagaaagcata
ctggagaatataaacaaagaaagatatcagatacctgatgagtggccatatcaagaggcc
agacgtctctttaaggaaccattagtcttaactggtgatgatcaacctgaaatcaaatgg
ggtcccccagatgaagagggtttgatagaattcctggtggaccaaaatggcttcaacaag
gacagagttacaaaggcgatagaaaagatcaaggcagccaagaataagtcttctcagggg
cggttagaatcattcttcaaaccagttgctaacacatcagcaccagctaaaagaaaggga
accaaatgtgttcttgtatctccgattccagtaacaaagtttagaatgttctccgtacaa
gcttcctttatgcgaacccaaccaagggccttttgcagcctaatcccgccatctttagat
atgagttcaaattactccatgccatttatcagaggtgtctgctacagcatatga

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