Ipomoea triloba (trilobed morning glory): 116031889
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Entry
116031889 CDS
T07384
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116031889
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116031889
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
116031889
NCBI-ProteinID:
XP_031130101
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Position
1:complement(31442229..31446816)
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AA seq
449 aa
AA seq
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MAVWKKRASFCLSSLLLLLFVAGVFARVHSNGGSDLRTAEKEELQSSHNSTTMAARLAEV
EEALSKQAVDDPEEVASMVAENIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWHNNRQRL
ADCGIGFGRNAIGGRDGQLYVVTDHEDDDPVNPKPGTLRHAVIQDEPLWIIFKRDMVITL
KEELIMNSFKTIDARGANVHIANGACITIQFITNVIIHGLHVHDCKPTGNAMVRSSPSHY
GWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHFAHHNEVMLLG
HSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIN
SQGNRYLAPVNPFAKEVTKRVETSQSEWRGWNWRSEGDLMLNGAYFTPSGAGASASYARA
SSLGAKSSSLVGAITATAGPLACRQGRTC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtggaagaaacgtgcttcgttttgtctgagctctctgctgcttctcttgttc
gtcgccggagtttttgctagagtacacagtaatggcggttctgacttgaggactgcggag
aaggaggaattgcagagctcgcacaactcaacaacaatggcggcaaggttggcggaggtt
gaagaggctttgagcaagcaggcggttgatgatcctgaagaggttgcctccatggttgca
gagaacatccggaatagcacagagaggcgaaaacttggatatttctcatgtgggactggt
aatccgattgatgactgctggcgttgtgaccccaattggcacaataatcgccagcgtctt
gcggactgtggaattgggtttgggcgcaatgccattggtgggcgtgatggtcagctctac
gttgttactgatcatgaagatgatgaccctgtgaaccctaagcctggcactcttcgccat
gctgtgatccaggatgaacctctctggattatcttcaagcgcgacatggttattacactg
aaggaggaactcattatgaacagtttcaagaccattgatgcgcgtggagccaatgtccac
attgctaatggagcctgcatcacaatacagtttattaccaatgtgatcattcatggtcta
catgtccatgactgcaaacccacaggaaacgcgatggtcaggagctccccatctcattac
ggttggaggacaatggcggatggtgatgccatttccatcttcggctcaagccatatatgg
gtcgatcacaactcactctctaactgtgctgatggcctcgttgatgctgtcatgggctca
actgccattaccatttccaacaatcatttcgcccaccataatgaggtcatgctgttgggc
cacagtgactcttacactagggacaagcaaatgcaagtgacaattgcctataaccacttt
ggggagggcctcattcagagaatgccaaggtgtaggcatgggtacttccatgtggtgaac
aatgactacactcactgggagatgtatgctattggtggaagtgctagcccaaccatcaac
agtcaaggcaaccggtaccttgctccagtcaatccttttgccaaggaggtgacaaagagg
gttgagacatcacaaagtgaatggagaggttggaactggagatcagagggagatttgatg
cttaatggagcctattttaccccatctggagccggtgcctcagccagctatgcaagagct
tcaagcttaggtgccaagtcctcttctttagtcggcgcaattactgcaactgctggtcca
cttgcttgccgccagggccgcacatgctag
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