Ipomoea triloba (trilobed morning glory): 116032023
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Entry
116032023 CDS
T07384
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Module
itr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116032023
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
116032023
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF4135
Motif
Other DBs
NCBI-GeneID:
116032023
NCBI-ProteinID:
XP_031130269
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Position
10:3849841..3862847
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AA seq
390 aa
AA seq
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MNTIIYCAFTFNFTFVLFLLAHLGESADIKVAAKAGVDISPELLKAWTEACAATTPSTIV
IPKGTFEMKQALLKGPCKAPVELQIQATLKAPPNPNDMDGKREWLTVEYVDHFTLSGGGT
LDGQGNVQVYAAKDKGFKSDKLPNNLSFNFMKNSVIRDITTLNSKLFHVNVFGGNNLTFE
KFTVKAPADSPNTDGIHIAKIKDVTVKDSVIGTGDDCISIGDGLENLHITGVTCGPGHGI
SVGSLGKTPGEEPVKGVFVKDSKFVGTDNGVRIKTWPNSHPGVVTDIHYENIDMKDVKNP
IVIDQEYCPNNECSKQKPSLVKISKVSYRNIKGTSATEEAVILACSSGVPCEGVEIGEIN
LTFKGGAAKSLCSNVKPTLTGKQVPAVTCK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaataatttattgtgccttcacatttaacttcacatttgtattattcttgcta
gcgcatcttggagagagtgctgatatcaaagttgctgcaaaagccggtgtagatattagt
ccggaattgttgaaagcttggacagaagcatgtgcagctacaactcccagcaccattgtg
atcccaaaaggcactttcgaaatgaaacaagctctacttaagggtccatgcaaagcccca
gttgagctccagattcaggctaccttgaaggcccctcctaatcctaatgatatggatggc
aaaagggaatggctaacggttgaatacgtagatcatttcacactctcgggtggtggcact
cttgatggccaaggaaatgtacaagtttatgccgctaaagacaaaggttttaaaagtgat
aagttgcctaacaatttgagcttcaatttcatgaaaaattcggtcatccgagacataact
actctaaacagtaaattattccacgtcaatgtttttggtggcaataacttaacgtttgag
aagttcactgttaaagcgccagcggatagtcccaatacagatggaattcatattgcaaaa
ataaaggatgttacggttaaagattctgttataggaactggagacgattgcatatccatt
ggtgatgggctagaaaaccttcacatcactggtgtgacatgtgggccaggacacggcatc
agtgtgggaagccttggcaagaccccgggtgaagagcctgtgaagggtgtctttgtaaaa
gactccaaatttgttggtacagataacggtgtcagaattaaaacatggcctaattctcat
cctggagtcgtaactgatatacattatgagaatatagatatgaaagacgtcaaaaatcca
attgtgattgatcaagaatactgcccaaataacgaatgctcaaaacagaaaccgtcactc
gtaaagataagtaaggtaagctataggaacataaaaggtacttctgcaacagaggaagca
gtgatccttgcatgcagtagtggggtgccatgtgaaggagttgaaattggtgaaattaat
ttgacattcaaaggaggagctgcaaagtctctttgttcaaatgtgaaacctacattgacc
ggaaagcaagttcccgcagtgacttgcaaatga
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