Ipomoea triloba (trilobed morning glory): 116032103
Help
Entry
116032103 CDS
T07384
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Module
itr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116032103
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116032103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
DUF7119
Motif
Other DBs
NCBI-GeneID:
116032103
NCBI-ProteinID:
XP_031130368
LinkDB
All DBs
Position
1:complement(32533769..32535525)
Genome browser
AA seq
390 aa
AA seq
DB search
MGRRVSYFFPLALTLVFLAAAATVANAMYNVESYGAKADGRTDSSAAFLKAWDAVCALNR
PATILVPRGEFLLRNVLFHGEKCGNRNGITFQISGTLLAPSDYNVIGHSDAWIKFNRVTA
LSIIGGTLDAQGSSLWKCKNGKGGCPEGSTTLAIYDSDNVAIMGLTSQNSQKFHILIKGT
RNAKLQGVKISAPEDSPNTDGIHVQSSSGVTITNSNIGTGDDCISIGPGTTNLLVQSIAC
GPGHGISIGSLGWSANEAGVENVKVRNVQFTGTENGVRIKTWARPSNGYVRNVLFQRATM
VDVHNPIIIDQNYCPHNENCPHQSSGIKISGITFEDIHGTSATEVGVELQCSKSRPCSGI
TVDDVKLTYNGRPAQASCTNAACPRIFSRY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtagagtttcttatttcttcccacttgctttgaccttagttttcttagcggcg
gctgccacggtggctaatgcgatgtacaacgtggagagctacggggcgaaggcggacggg
cggactgactcgtccgccgcctttttgaaggcctgggatgcggtgtgtgcgttgaacagg
ccggccaccattttggtgccgcgtggggagttcttgctgcgaaacgtcctgtttcacggc
gagaaatgcgggaacaggaatggcataacgttccagatcagcggaacgcttctcgccccg
tcggactataatgtgattgggcattccgatgcttggatcaagttcaacagggtcaccgcc
ctttccatcatcggcggaaccctcgacgcccaaggttcctctctttggaaatgcaaaaac
ggcaagggtggttgccctgagggatctacgacactggctatatacgactctgacaatgtg
gctatcatgggactaacttcacaaaacagccaaaagttccatattttgataaagggcacc
cgcaacgccaagctacaaggagtgaagatctctgccccggaagacagccccaacaccgac
ggaatccacgtccagtcttcctccggagtcaccatcaccaattccaacatcggcaccggc
gacgactgcatctccatcggtcccggcaccaccaacctcttggtccaaagcattgcttgc
ggccccggccacggaataagtattgggagtctagggtggtctgcgaatgaggcgggagtg
gagaacgtgaaggtgaggaacgttcagttcaccggaacggagaacggagttcggatcaag
acgtgggcgaggccgagcaatgggtatgtgagaaacgttcttttccagcgggcaaccatg
gtggacgtccacaacccaatcatcattgaccaaaactactgtccccataacgagaactgc
ccccaccagtcctccggcattaagatcagcggcataacgtttgaagacatccacgggacg
tcggcgacggaggtgggcgtggagttacagtgcagcaaaagccggccgtgcagtgggata
acggtggacgacgttaagctcacttataacggccgtccagcccaagcttcctgcaccaat
gctgcttgcccccgtatcttcagccgttattaa
DBGET
integrated database retrieval system
