KEGG   Ipomoea triloba (trilobed morning glory): 116032114
Entry
116032114         CDS       T07384                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    116032114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:itr03400]
    116032114
DNA repair and recombination proteins [BR:itr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     116032114
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 RAWUL WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_ACSF4 Beta-prop_Aladin
Other DBs
NCBI-GeneID: 116032114
NCBI-ProteinID: XP_031130377
LinkDB
Position
10:complement(277302..289996)
AA seq 758 aa
MHRVASVGNTSNSSRPRKEKRLTYVLNDADDTKHCAGVNCLAVSKSSVPDGCDYLFTGSR
DGTLKRWALAEDGATCSATFESHVDWVNDAVLTGGNTLVSCSSDTTVKVWNSLSDGICAR
TLRQHSDYVTCLAAAEANNNIFASAGLGGEVFVWDLEAALAPVSKSSDGTEDECSNGVNG
TANSLPVTSLRPISSSNNISVHATQSQVYAPTAAKGHKESVYALGMNESGTLLVSGGTEK
VIRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAV
HTDSVWALASTPSFSHVYSGGRDLSLYLTDLATRESVLLCTKEHPIVQLALHDDGIWVAT
TDSSVHRWPAEVQNPLKVFQRGGSFLAGNLSFSRARISLEGSTPVPVYREPSFSIPGTPG
IVKHEILNNRRHVLTKDTAGAVKLWEITRGAVIENYGEVSFEKKKEELFEMVSIPAWFTV
DTRLGNLSVHLDTPQCFSAEMYSVDLNIAGKPEDDKINLARETLKGLLAHWLTKRRQRFG
SQVSGNGEVPPGKDISSRNLAVSRVEVDSNADNDSAVYPPFEFSAVSPPSIITEGSQGGP
WRKKITDLDGTEDEKDFPWWVLDCVLNNRLPPRENTKCSFYLHPCEGSTVQILTQGKLSA
PRILRIHKVINYVIEKMVLDKPPLDSLNSDGTFVPGGPASGVGEFRSGLKPWQKLKPSIE
ILCNNQVLAPDMSLATVRAYIWKKPEDLVLNYRVTPVR
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgcaccgtgtagcgagtgtaggcaacacatctaactcaagtaggcctcgcaaggagaag
aggttgacgtatgtgttgaatgatgcagatgataccaagcattgtgctggtgtgaattgc
ttggctgtatcgaagtcatctgtgcctgatggatgtgactacctatttactggtagccgt
gatggcacattaaaaagatgggcattggctgaagatggtgccacttgctctgcgacgttt
gagtcccatgttgattgggtaaatgatgctgttctaacaggtggtaacacattagtgtca
tgttcctcggacactacagtcaaggtgtggaatagcttatctgatgggatttgtgctagg
acacttcgtcagcattctgactatgtcacatgccttgctgcagctgaagcaaataacaat
atctttgcatctgctggccttggtggagaggttttcgtatgggatcttgaagctgcactt
gctcctgtctctaagtcaagtgatgggactgaagatgaatgttctaatggtgtcaatggc
acagcaaattcattgccagttacaagtcttcggcctattagctcaagcaacaatatttcc
gtgcatgctactcagtcccaagtatatgctcctactgctgcaaaaggacacaaggaatca
gtttatgcactgggaatgaatgaaagtgggaccctacttgtttctggtggaactgagaag
gttatacgcgtttgggatccaagaactggatcaaagactatgaaacttagagggcataca
gataacattcgagcactgctactggattctactggcaggttctgtctatcaggatcctct
gactccatgatcaggctatgggatcttggccaacagcgatgtgtacactcctatgctgtg
catacagactctgtttgggcacttgctagcactccatcatttagtcatgtctacagtggt
ggaagagacctctctttatacttgacagacctggcaacaagagagagtgtactactctgt
acaaaggaacacccaattgtgcaattagcattgcatgatgatggaatatgggtagcaaca
actgattcttctgtacatagatggccggcagaagtgcagaatcccctgaaagttttccaa
agaggaggttcattcttggctggaaatttgtcattttctagagcaaggatttcattagag
ggatcaacacctgtgcctgtttatagagaaccatcctttagcattcctgggaccccagga
atagttaaacatgagattctaaacaacagaaggcatgtccttactaaggatactgctggt
gcagtgaaattgtgggagatcacaagaggcgctgtgattgaaaactatggtgaggtctca
tttgagaagaagaaagaagaactttttgagatggtaagcatacctgcatggtttactgtg
gatacaaggcttggaaacttgtctgtacatttggatacaccccagtgtttctctgctgag
atgtattctgtggaccttaacattgctgggaagcctgaggatgacaagattaatttggca
cgagaaacccttaaaggtcttttggctcattggttaaccaaaagaaggcagagatttgga
tcccaggtgtcaggaaatggggaggtcccacctggaaaggacatctcttctaggaattta
gctgtatcaagagttgaggtagatagtaatgcagataacgattctgctgtatatccacca
tttgagttttcagcagtttcccctccatctatcattacggagggctctcaaggtgggcca
tggagaaagaaaattacagacttagatggaacagaagatgaaaaggatttcccctggtgg
gttctggactgcgtgttgaataatcggcttcctccaagggaaaataccaaatgcagcttt
tatttgcatccatgtgaaggttctactgttcagatacttactcaaggaaaattgagcgct
cctcgtatcttgagaatacataaagtaatcaactatgtcattgaaaagatggttcttgat
aagccgccattggatagtttgaattcagatgggacttttgttcctgggggacctgcctca
ggtgttggagaatttcggtctggccttaaaccttggcaaaagcttaagccttctattgag
atcttgtgcaataaccaggtattagctcctgatatgagcttagccacagttcgggcttat
atatggaagaaacctgaagaccttgttctcaactatcgggtgacaccagtcaggtga

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