Ipomoea triloba (trilobed morning glory): 116032124
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Entry
116032124 CDS
T07384
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116032124
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
90S particles
Other 90S particles
116032124
Pre-60S particles
Other pre-60S particles
116032124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SCAP
WD_LRWD1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_SPT8
WDR54
Motif
Other DBs
NCBI-GeneID:
116032124
NCBI-ProteinID:
XP_031130396
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All DBs
Position
1:32793473..32801184
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AA seq
496 aa
AA seq
DB search
MIAAISWVPKGVAKSVPAAAEPPSKEEIEEILKSGILTKSDEAENGEADEETDQEMDVDT
SRKDNNDEVDHESAVADAHNEDSKDTTVDLTDALRELDMDNYDDEEDGIELFGPGLKDLY
YASNDMDPYLKDKDDNDSEEEEDTAIKPDDAVIVCARNEDDVSHLEVWILEDSTDADLNM
YVHHDIIIPAFPLCTAWLDCPLKGGEKGNFIAVGSMEPAIEIWDLDIMDEVQPSVILGGI
AEKKKGKKGKKKSIKYKKDSHTDSVLGLAWNKEYRNVLASGSADKSVKIWDVSTGTCNLT
MTDHVDKVQSVAWNPFKPQILLSGSFDRSVLLKDVRQPSHEGFKFSVADQVESLKWDPNA
EHSFLVSLENGTITSFDIRAANPSSTSEIKPNFTLHAHDKAVCSISFNPLVPNLLATGSL
DKTVKLWDLSNNQPSCIATRNPKAGAVFSVSFSDDCPFLLAIGGSKGKLQMWDILSEDAI
AKKYEQYAQKTRSKSK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagctatttcctgggttcctaagggggttgctaagtcagtccccgctgcagct
gagcctccttcgaaagaagaaattgaagagattttgaagagtggcattcttacaaaaagc
gatgaagctgaaaatggagaagctgatgaagaaactgatcaagaaatggatgttgataca
tctagaaaggacaacaatgatgaagttgaccatgaatcagctgtagcggatgcacataat
gaggattctaaggacaccacagttgatctaactgatgctttgagggaattggacatggac
aattatgatgatgaggaagatggcatcgagctctttggtccgggacttaaggacttatat
tatgcaagtaatgacatggatccgtatcttaaagataaggatgacaatgactctgaggag
gaagaggacacagctataaaacctgatgatgctgttatagtttgtgcacgtaatgaagat
gatgtcagtcaccttgaggtttggatattggaggattcaacagatgctgacttgaacatg
tatgttcaccatgatatcataattccagcatttcctctttgtacagcatggcttgattgc
cctcttaaaggaggggagaaagggaactttattgctgtgggctccatggaaccagccatt
gagatttgggaccttgacattatggatgaagtccaaccatcagttatcctgggtggcatt
gctgaaaaaaagaaggggaagaaagggaagaagaaatcaatcaaatacaaaaaggacagt
cacaccgattccgtacttggccttgcttggaacaaggagtataggaatgttctagccagt
ggtagtgctgacaaatcagtcaagatttgggatgtgtcaacaggaacatgtaatctcacc
atgactgaccatgttgacaaggtgcaatcagttgcgtggaatccatttaagccacaaatt
cttctttctggatcatttgatcgttctgttttgttgaaagatgtaaggcaaccttcccat
gaaggatttaaattttcagtggctgaccaagttgaaagcttgaaatgggatccaaatgct
gagcattcatttctggtcagcttggagaatggaacgattactagttttgatatccgggct
gctaatcctagttctacttctgagattaagccaaatttcactctccatgctcatgataaa
gcagtttgctcaatttcctttaatccattggtcccaaatcttcttgcaacaggatcccta
gataaaacggtaaaattatgggatttgtccaacaatcaaccttcatgtattgccacaagg
aaccccaaagctggggctgtgttttcagtttccttctcagacgactgcccctttttgctg
gccataggtggctctaaaggaaagcttcaaatgtgggatattttgtccgaggatgccatc
gccaagaaatatgaacaatacgcccagaagacaagatctaaatctaagtag
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