Ipomoea triloba (trilobed morning glory): 116032232
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Entry
116032232 CDS
T07384
Name
(RefSeq) vacuolar sorting protein 3
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116032232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116032232
Membrane trafficking [BR:
itr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116032232
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Gene cluster
GFIT
Motif
Pfam:
CNH
zf-Vps39_C
Clathrin
Vps39_1
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
116032232
NCBI-ProteinID:
XP_031130581
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Position
10:7978460..7991836
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AA seq
950 aa
AA seq
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MANPKPSTKPEPESKSHSRTVLKLLAEFNPLDSNSSQIRSLAISTLSDSQALIYLGTTSG
SLLSLSVNPNSPSTSSALVCHSQVTVGAGPVNSIHVLDDIGKIIVVSDGFLYLVDLLLLD
PIKKLSLIKGVTALTRRFRSSRISTGSDNVVQRLNGMKLKEDGCFFAVAVGKKLVLVELV
FSGSLVILKEFPGVSEGIISLAWVDDSIIFGTRNGYYLYSCSTGQSGLLFSLPDLSGPPL
TKILCKEWKVMLMMDNVGVIVDAEGQPVGGSLVFREAPDSIGELGSCVVVMRNGKVELFH
RKSGNCVQRVPFAGEVGNKCIVADEGNDRGKLVALATGSKVICYQKVPPEDQIKDLLRKK
NVGEAVSLIDELWSEGEITKDMLSFVHAQVGFLLLFDLHFAEAVDHFLLSETMQPSELFP
FIMREPNRWSLLVPRNRYWGLHPPPAPLEKVIDDGLMAAQRAIFLKKAGVESAVDDKFLL
NPPSRADLLEVAVKNMTRYLEVSRFKDLTLPVKEGVDTLLMYLYRALNRIDDMEKLASSD
NNCVVEELESLLNESGHLRTLAFLYASKGLSSKALAIWRILARNSSNMKEPAVVNDLQDN
SKSVDSDQETAVVEASKILEESSDQDLVLQHLGWISDINQVLAVQVLISEKRMDLFSPDD
VIAAIDPKKVEILLRYLQWLIEDKELDDTQFHTTYALLLAKSALDAFEIEHLSENSIFDS
HVRERLQIFLQSSDLYDAEEVLDLIEGSELWMEKAILYRKLGQEALVLQILALKLEDCEA
AEQYCAEIGRPDAYMQLLDMYLDPMNGKEPMFAAAVRLLHNHGEMLDPLQVLERLSPDMP
LQLASETMLRMLRARLHHHHQGQIVHNLSRALEVDASLARLEERSRHVLINDESVCDSCH
ARLGTKLFAMYPDDTIVCYKCFRRQGESTSVTGRNFKKDSLYKPGWLVTR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatccgaaacccagcaccaaacccgaaccggaatccaagtcccactcccgtact
gttctcaagctccttgcagagttcaaccctttagattccaattcctctcaaattcgatct
ctcgcaatctccacgctttccgattcccaagccttaatctaccttggcaccacttcgggc
tctctgctctcgctatctgtaaaccctaattctcccagcacctcctcggctctagtttgt
cacagccaagtcactgtcggtgccggccctgtaaattcaattcacgtcctcgatgatatc
ggtaaaataattgtagtgtccgatggatttctttacttagttgatttgcttttgcttgac
ccgattaagaaactcagtctgatcaagggggttactgctctaactcggagatttcgaagt
agtaggatcagtactggtagcgacaatgttgtacagcggctaaatgggatgaaactgaaa
gaagacgggtgtttctttgcggttgctgttgggaagaaattagtgctagttgagttggtt
ttcagtggatctttagtgatcctgaaggaatttccgggtgtttctgagggaattattagt
ttagcttgggtggatgattctataatttttggcacgagaaatggatattatttatattct
tgttcaactgggcagagtgggttgttattttcgctgcctgatttgtccgggccaccgctg
acgaaaatactgtgtaaggaatggaaggttatgctaatgatggataatgttggtgttatt
gtggatgctgaaggtcagccggtaggtggcagcttggtatttcgtgaagccccagattca
ataggagagctagggtcgtgtgttgtcgtgatgaggaatgggaaggtggaactgtttcac
agaaaatctggaaactgtgtgcagcgggttccatttgctggtgaagtaggtaataagtgt
attgtggcagatgaagggaatgacagaggaaaacttgttgctttggcaacaggctccaag
gtcatctgttaccagaaggtgccaccagaagatcaaattaaggatcttctgcgcaagaaa
aatgttggtgaagctgtctctttgattgacgagctctggagtgaaggtgaaattacaaag
gatatgctatcctttgtccatgctcaagtgggattccttttgctgtttgacttacatttt
gcggaagcagttgatcacttcttgctttcagaaactatgcaaccatctgaactcttccca
tttatcatgcgggagccaaatcgttggtcactgctggttccaaggaatcgatattggggt
ttgcatcctcctcctgcacctcttgaaaaggttattgatgatggattaatggctgctcaa
agagctatttttctaaagaaggcaggtgttgagagtgcagttgatgacaagtttctcttg
aaccctcccagtagagctgatttgctggaggttgcagttaaaaacatgaccaggtatttg
gaagtttcccggtttaaagatttgactctgccagtaaaagagggagtcgacacccttttg
atgtatctctatagagctcttaatcgtattgatgacatggaaaaacttgcatcttcagat
aacaactgcgtagtggaggagttggagtcattattgaacgaatctgggcatctaaggaca
cttgcttttttgtatgccagcaaggggttgagctctaaagctcttgccatctggcgcata
ttggctagaaattccagcaacatgaaagaacctgctgtggtaaatgatctacaagacaat
tccaagagtgttgattctgatcaagagactgctgttgttgaggcctcaaagattcttgag
gagtcatctgatcaagatttggtattgcaacatctaggatggatttcagatatcaaccaa
gtattggcagttcaagtcctcatatcagagaaaagaatggatctcttctcacctgatgac
gtaatagctgcaattgatccaaaaaaagtggaaattcttcttcgatatctccagtggcta
attgaagataaggagttggacgacactcagtttcatacaacatatgctctcttgcttgca
aagtcagctcttgatgcttttgaaatagaacatttgtcagagaattcaatctttgatagc
catgtcagagagaggctacagatctttttacaatcatctgacttgtatgacgcagaagag
gtccttgacttaattgaaggttctgagttatggatggagaaggctattctttaccggaag
cttggtcaggaagcactagtcctccaaattttggcattaaagctagaggactgtgaagct
gcagaacagtattgtgccgagattggtagaccagatgcatatatgcagttgcttgatatg
tatttggatcccatgaatggcaaagagcccatgtttgcagctgctgttcgccttctacac
aaccatggagaaatgctggacccattacaagtcttggagaggttgtcacctgatatgcct
cttcaacttgcttcagagacaatgttaagaatgttgagagcacggctccatcatcatcat
caaggccaaatcgtacataatctatctcgtgctttggaagttgatgcaagcttggcaaga
ttggaggaaagatcacggcatgttctgatcaatgatgaatctgtatgtgattcttgccat
gctcgtcttggaaccaaactatttgctatgtacccagatgacacaattgtttgctacaag
tgctttcgtcgccaaggtgagtccacttcagttacaggtcgcaattttaagaaagatagt
ttatacaaacctggttggttggtgacgcggtaa
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