Ipomoea triloba (trilobed morning glory): 116032304
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Entry
116032304 CDS
T07384
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116032304
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116032304
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
116032304
NCBI-ProteinID:
XP_031130662
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Position
10:27671079..27674870
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AA seq
647 aa
AA seq
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MQDFTSHANNGGATYKSYRPPSRPFYVPAGNVAFRLLCHASRVGGVIGKSGCIIKQLQQD
TTAKIRVEDSGNNADEHRVIVVIASPLVNRKIKFCAARNEEEGEEEERTDGGSEEFEVSA
AQEAVVRVFERVIEVTAESVGMVLGTGSLVSCRLLAKVNQVGSVIGKGGMVVDLIRKETG
CRIKVITSENLPACTLPGDKVVEIEGEILGVKKALIAVTSKLQDGMQPEKATISDNRVGD
ISQEALHEPQVDLPEQSSSMLPTVPTSPTSSHSVGHFFSQGADSSSNIESKMSKQEVTFK
ILCPADKVGVIIGKAGTIVKALEHETGAAIRVGPIVPECYERLITITAFENLESHQSPAQ
RAILVVFNKLAAINSEKGSNLFQKGSFISARLLVQANQAGCLLGKGGSIIAEMRKMTGAR
IILHRGDQVPKCASENDEVVEITGEFVNVRDALCSVTDKLRNNLLQVKSSNNVGFGSSTL
TTENTPYGRLKNGPPGPGFNHSSGASSVTNPPSDLVQSMGDLGISHNMDGVRSQSIWQSQ
SQIGINQRGTTNLGRGSISAKGGLELGRSAVVTNTTVEIVVPENVIGSVYGENGSNLERL
RQISGAKVTMREPHPGTTDRTIVISGTPDETQTAQSLLQAFIINGSP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttcacctctcacgccaacaacggcggcgccacctacaaaagctaccggccg
cccagccgtcccttctatgtgccggcgggcaatgtcgccttccgcctcctctgccacgcc
tcgcgcgtcggcggcgtcattggcaagtccggatgcatcatcaagcagctccagcaggat
accaccgccaagattcgggtcgaggactccggcaacaacgcggacgagcaccgggtgatt
gtcgtcatagcttcccctttggtcaacaggaagattaaattttgcgccgctaggaacgaa
gaggaaggagaggaggaggagagaacagatgggggaagtgaggaatttgaagtatcggcg
gcgcaggaagccgtggttagggttttcgagagagtgattgaagtgacggcggagagcgtc
gggatggtattgggcaccggaagtttagtttcgtgtcgactccttgcgaaggttaatcag
gtcgggtcggtgatcggaaaaggtgggatggttgttgatttgataaggaaggaaaccggc
tgtagaattaaggtcatcacatcggaaaatctgccggcttgcaccttgccgggggacaaa
gtggtggagattgaaggcgaaattctgggtgtgaagaaagcacttattgctgtcacttcc
aagcttcaagatggtatgcaacctgagaaagcaacaattagtgacaaccgggttggtgat
atttctcaggaagcattgcatgaaccgcaagttgatttacctgaacaaagcagttcaatg
ctgcctactgtccccacaagccctacctcttcccactcagttggtcactttttctcacaa
ggagctgatagttcttccaacattgagtcaaagatgtcaaagcaagaggttactttcaaa
attctctgtcctgctgataaagtaggggttataattggcaaggcaggaacaattgttaag
gctcttgaacacgaaacaggtgcagctatcagggttgggccaatcgttccagagtgttat
gagcgattgataaccattactgcatttgagaatttagaatcacatcaatccccagcgcaa
cgtgctattcttgttgtttttaataaacttgcggccatcaactctgagaagggatcgaat
ttatttcaaaaagggtcatttatttcagctcgacttctagtacaagcaaatcaagctggg
tgtttattgggaaaaggaggttcgataatagcagagatgagaaagatgactggtgcccgc
ataatattacataggggtgaccaagttccaaagtgtgcttcagagaatgatgaagtagta
gagattacaggtgaattcgtaaatgttcgagatgctttatgtagtgtcactgataagctg
cgcaataacctattgcaagtgaaatcgtcaaataatgttggttttggcagttccacctta
acaactgagaatactccctatggcagattgaagaatggtcctcccggtcctggattcaat
cactcttctggtgcctctagtgttactaatcccccttctgacttagtacaaagcatggga
gatctcggaatttctcacaacatggatggtgtgcggtcacaaagtatttggcaatcgcag
tcacaaattggaataaatcagagaggcactaccaatttaggcagaggatcaatttcagct
aaaggtggtttggagcttggcaggtctgccgttgtgacaaatacaactgtggagatcgtg
gttcctgaaaatgttattgggtcggtttatggggagaatggcagcaatttggaacgtctg
agacagatttctggggcaaaggtgacgatgcgtgagccacatcctggaactactgaccgg
actattgtgatctctggaactcctgatgaaactcaaaccgctcagagcctccttcaagca
tttataattaatggatctccgtga
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