Ipomoea triloba (trilobed morning glory): 116032415
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Entry
116032415 CDS
T07384
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116032415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116032415
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116032415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116032415
NCBI-ProteinID:
XP_031130813
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All DBs
Position
10:28603295..28610602
Genome browser
AA seq
957 aa
AA seq
DB search
MGKKKTNKANGDSQFSPSTIFVSNLPFTLTNTELEQTFSEVGPIRRCFLVTKKGSTEHRG
FGFVQFASVEDAGRAIELKNGSTVGGRKLGVKHAMHRAPLEQRQSKGSQDKAPQERDRDG
TLPAEIVKHEQDSNSQGTGKPRKRKATVLCSGMPDEKNCSEKQRVARTVIIGGILSADMA
AEVHRLAKECGTVCSVTYPLPIEELEYNGLAQDGCKMGASSVLYTSVKSAQSCVATLHQK
EIHGGAIWVRQLGGEGSKTNKWKLIVRNIPFKATVDEIKSMFSTVGFVWDVYIPQNAETG
LSKGFAFVKFTSKQDAEKAIKTFNGKNFGKRPIAVDWVVPKKVYVADSQSTAASEDGRNE
SDGDDDDSVDLEDQEMEIDGESQQALGSDSASELEEAEEEKDEEDEDADEEEEEDVDKDT
QPKVNIDMEADIARKVLENLISSTSKGAAASANESSSLPKGEKSEVVSVHDKSSDASHVD
ETPPEGSSKSKEKTSRPTEGAEDLQRTIFINNLPFDVDNEEVKQRFSAFGEVESFVQVLH
QVTKRPRGTGFLKFKTADAAEAALLAANTAAGLGIFLKGRQLKVLKAVDRKTAQDKELEK
TKKDDHDHRNLYLAKEGLVLEGTPAAEGVSASDMSKRKTLHEKKMIKLKSPNFHISRTRL
IIYNLPKSTTEKDLKKLCIDAVTSRATKQKPTIRQIKFLEDHKKGKVVVKNQSRGVAFVE
FTEHQHALVALRVLNNNPGTFGPEHRPIVEFAVDNVKKLMHRKEKIQVQQNESHHKTDKS
WQNDPANEQDSRHSKSRKRKSRGDASSISACENSEVKTGAKGAIAEPARPTKKQKPKKML
ISLKQDLIENRQKGKFADIGSQPTKSASSNAPKPVPIKDGAMRSKARSEDETTQEIQRNS
SKRAKKSKKNKDPLGRDVVDKLDVLIEQYRSKFSKGSSDQIDGNKHGSKRLRRWFQS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaagaagacgaacaaggctaatggcgatagccaattctctccctccaccatc
ttcgtttctaacttgcctttcacccttacgaacactgagctggaacaaacgttcagtgaa
gttggccccatcagaaggtgctttttagtaacaaaaaaaggttctactgaacaccgaggt
tttggctttgtccaatttgcctcggttgaagatgctggtcgtgctattgaactcaaaaat
ggctcaacagttggagggagaaaacttggagtcaaacatgcaatgcatcgggctcctctt
gaacagcgtcaatcaaagggaagtcaagacaaggctcctcaggaaagggatagggatggc
actttgcctgctgaaatagtcaagcatgaacaagattcaaactctcaaggaacaggtaag
cccagaaaaaggaaagctacagtactttgcagtggtatgcccgatgaaaagaattgttca
gaaaagcagagggttgctaggacagtcataattggaggtattcttagtgcggatatggca
gcagaagttcaccgtcttgccaaagagtgtggcacagtatgttctgttacttatcctctt
cccatagaagaacttgaatataatgggctggctcaagatggttgtaaaatgggtgcttca
tccgtgctttatactagtgtgaaatcagctcaaagttgtgttgcaaccttacatcaaaaa
gaaatacatggcggggctatttgggtgcgccaacttggtggagagggttccaagactaat
aaatggaaactaatagtgaggaatattcctttcaaggccacagtggatgagataaagagt
atgttttcaactgttggctttgtatgggatgtatatattcctcaaaatgcagagacaggt
ttgtctaagggatttgcatttgttaaatttacatccaagcaagatgcagaaaaggctatt
aagactttcaatggaaagaattttggtaaaaggcctattgctgttgattgggttgtacca
aaaaaggtttatgttgccgatagtcaatctactgcagcttcagaagatggtcggaatgaa
agtgatggagatgatgacgatagtgttgatttggaagatcaggaaatggagattgatgga
gaatcccaacaagctcttgggagcgacagtgcctctgaattagaagaagcagaagaagaa
aaagacgaagaagatgaagatgcagatgaagaagaagaagaagatgttgataaggacacc
cagcccaaagttaatattgatatggaagcagacattgcaaggaaagttcttgaaaattta
atttcgtctacttctaaaggagcagctgcttctgccaacgaatcttccagcttgcccaag
ggagagaagagtgaagttgttagtgtacatgacaaatcctctgatgcatctcatgtggat
gaaacgccacctgaaggttctagtaagagtaaggagaaaacctccaggccgactgaagga
gcagaggatctgcagcgaacaattttcattaacaatcttccttttgatgttgataatgaa
gaagtgaagcagcgcttttctgcatttggtgaagtggagtcctttgttcaagttcttcac
caagtcaccaagcgacccagagggactgggtttctcaaatttaaaaccgcagatgctgct
gaagctgcacttttggctgccaacacagcagctggtttgggtatatttctgaagggtagg
caattaaaggttttaaaggctgttgacagaaaaacagctcaggacaaggagttggagaaa
accaaaaaggatgatcatgaccatcgcaacctttatcttgccaaggaaggacttgttttg
gagggaactcctgctgctgagggtgtttcggcaagtgatatgtctaagcgcaagacgttg
catgagaaaaagatgatcaagcttaagtcccctaacttccatatctcaaggactcgacta
attatatacaatcttccaaagtcaacgactgagaaagatcttaagaaactttgcatagat
gcagttacctctcgagctactaagcaaaaacccacaatcaggcagataaaatttttggaa
gatcataaaaaaggtaaagtggtagtgaagaatcaatctcgtggagttgcctttgttgag
ttcacggagcaccaacatgcacttgtagctctgagagttcttaataataatcctggaact
tttggccctgaacatcgtccgattgtagagtttgctgttgataatgtcaagaaactgatg
caccgtaaagagaagattcaagtccagcagaatgaatctcatcataaaacagataagtca
tggcaaaatgatcctgctaatgagcaggattctcgccatagcaagtcaagaaaacgcaaa
tctagaggggatgcgtcatcaatttctgcgtgtgagaacagtgaagtgaaaacaggtgcc
aagggagcaattgctgaaccagccagacccacaaagaagcagaaaccaaagaaaatgttg
ataagcttaaaacaggacctaatagagaaccggcaaaaaggaaagtttgctgacattgga
tctcaaccaactaaaagtgcctcgagcaatgcccctaagcctgtacctatcaaagatggg
gctatgagatcaaaagcaagatcggaagatgagaccacccaagagatacaaagaaacagt
tcgaagagagcaaaaaagtctaaaaagaacaaagaccctttgggacgtgatgtggtggac
aaacttgatgtgcttattgaacaatacaggtctaaattctcaaagggtagttctgaccaa
attgatggtaacaaacatggttctaaacggctcaggaggtggttccaatcataa
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