Ipomoea triloba (trilobed morning glory): 116032622
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Entry
116032622 CDS
T07384
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116032622
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Motif
Pfam:
Sel1
bHLH-MYC_N
Motif
Other DBs
NCBI-GeneID:
116032622
NCBI-ProteinID:
XP_031131141
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Position
10:complement(20289046..20292866)
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AA seq
683 aa
AA seq
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MRNRKIKNLRYLLLLLALVFPVATLGRQFVLVISQDDIKDLGTDTTTAAGETDSTEPGFD
DFIDSDAKPDHELDPGSWSPIFEPGTDPANQDEQEAAYYQAVRKMVTASSRGDARGMEEA
ASEMEAAAASGHAHAQSVMGFLYGMGMVRERNKAKSFLFHHFASEGGNMQSKMALAYAYT
RQEMHDKAVTLYAELAEVAINSFLISKDSPVIEPVRIHTGTEENKDALRKSRGEEDEDFQ
ILEYQAQKGNAGAMYKIGIFYYFGLRGVRRDHVKALSWFLKAVDKGEPRSMELLGEIYVR
GAGVERNYTKALEWLSLASKQQLYSAYNGMGYLYVKGFGVEKNYTQAKEYFEKAADNDEP
GGFYNLGVMYLKGIGVKRDLKLAGKYFILAANVGQPKAFYQLAKMFHTGLGLKKNVPMAT
ALYKLVAERGPWSSLSRWALESYLKGDVGKAFLLYSRMAELGYEVAQSNAAWILDKYGPR
SMCMGGSGICTDAERHQRSHALWWQASEQGNEHAALLIGDAYYYGRGTERDYERAAEAYM
HAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDQALDNDPAAKLPVMLALASLWIRM
NYADSFMVDMIDSLPEVYPKLETWVEDVLMEEGNATILTLIVCLLTVLYLRERQRRHAAA
AAFVGEAPPPHQADEQDMPPIVN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatcggaaaatcaagaacctcagatacctcctcctactcctagccctagtattt
ccggttgctacactcggccggcaattcgtcctcgtcatctcacaagacgatatcaaggac
ctcggaactgacaccaccaccgccgccggcgaaactgattccacggaacccggattcgac
gattttatagactccgatgcgaaacccgaccacgagctcgacccgggttcatggagcccg
atcttcgagccaggcacggatccggctaatcaagacgagcaggaggcggcgtactaccag
gccgtcaggaagatggtgaccgcttccagccggggggacgccaggggtatggaggaggct
gcgtcggagatggaggccgccgccgcgtcgggacacgcgcacgcgcagtcggtgatgggg
tttttgtacggtatgggaatggtgagggagaggaacaaagcgaagtcgtttttgttccac
cattttgcttctgagggcggcaatatgcagtcaaagatggctcttgcttatgcatacact
cgccaagaaatgcatgataaagcagttacgctatatgctgaattggcagaggttgctata
aatagttttctaatttcaaaagactcccctgtgatcgaaccagttcggatacatactgga
acagaggaaaataaagacgcgttgaggaagtctcgaggagaagaagacgaggatttccag
attttggaataccaagcacagaaaggcaatgcaggggcaatgtataaaattggtatattc
tactactttggattgaggggagtgagacgtgatcatgtcaaggcattatcgtggtttttg
aaggctgtcgataagggtgaaccaaggtctatggaacttcttggtgaaatatatgtaaga
ggagctggagttgagaggaactacaccaaggcgttagagtggctatcacttgcttccaag
caacagctttattcagcttataatggcatgggatatctttatgttaaaggttttggagtt
gaaaagaactatacccaggcaaaagagtattttgagaaggccgctgataacgatgagcct
ggcggattctacaaccttggggtgatgtatctgaaagggatcggggtaaagagggatttg
aagctggctggcaagtattttatactagccgctaatgtggggcagcctaaggctttttat
cagttggcaaaaatgttccatactggtttgggccttaaaaagaatgttcccatggcaact
gctttatacaaactagttgcagagcgtggaccatggagttctttgtctagatgggcacta
gagtcatatttgaagggagatgttgggaaagcttttctcctgtactctaggatggcagag
ttgggatatgaagtcgcacaaagtaatgcagcatggattcttgacaaatatggaccgagg
agtatgtgcatgggaggatctggaatttgcacagatgcagagagacatcagcgctcccat
gcattgtggtggcaagcttctgagcagggtaatgaacatgctgccctgctcattggagat
gcatactactatggtcggggtactgaacgagattatgagcgtgcagcagaggcttatatg
catgcaaaatcacaatccaatgctcaagccatgtttaatctggggtacatgcatgagcac
ggccaaggattaccatttgatcttcaccttgcaaagcgttactatgatcaagccttggat
aatgatcctgcagcgaagttgcctgtaatgctcgcccttgcaagcttgtggataagaatg
aactatgctgacagcttcatggttgatatgattgattcgttgccggaagtttatccaaaa
ctggaaacatgggtggaggatgtgctaatggaagaaggaaacgcgactatacttacactc
atcgtctgcctcttaacagtgctttatcttcgcgagcgtcaacggaggcatgctgctgct
gctgcttttgttggagaggctccacctcctcatcaggcagatgagcaggatatgcccccc
attgtcaattaa
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