KEGG   Ipomoea triloba (trilobed morning glory): 116032718
Entry
116032718         CDS       T07384                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RHA1B-like
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:itr04121]
    116032718
Ubiquitin system [BR:itr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116032718
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-RING_5 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-RING_16 zf-ANAPC11 Prok-RING_1 Rad50_zn_hook zf-C3HC4_3 RINGv zf-RING_4 zf-RING_Vps41 zf-RING_6 zf-RING-like zf_RING_Vps8_fungal Prok-RING_4 zf_RING_Vps8 RH_dom PHD_NSD zf-C3HC4_4 Rtf2 zf-C3H2C3 zf-Nse
Other DBs
NCBI-GeneID: 116032718
NCBI-ProteinID: XP_031131281
LinkDB
Position
10:complement(21795297..21796057)
AA seq 165 aa
MGFPVGYTDLFLPKMLVHVFTVLGFIRTCICLIFSVVGLGDFLEPEMAFQNRVETGSEPH
SVSATLIRELLPVVKFSELADPPESCAVCLYEFDRDDEIRRLTNCRHIFHRSCLDRWMDH
DQKTCPLCRTPFIPEDMQESFNERLWLASGISDFYGEYSPIAAGL
NT seq 498 nt   +upstreamnt  +downstreamnt
atgggttttccggtgggttacacggatcttttcctccccaagatgctggttcacgtcttc
acagtcttaggtttcatcagaacatgtatttgcctgattttcagcgtggtaggtctcggg
gatttcctggaacccgaaatggcgttccagaaccgggttgaaaccgggtcggagccccac
tccgtgtcggctaccctgatccgggagctcctgccggtggtgaaattctcggagctggcg
gacccgccggagagctgcgccgtgtgcctgtacgagttcgacagggacgacgagatccga
cggctcacgaattgccgccacatattccaccggagctgcctcgaccgttggatggaccac
gaccagaagacctgcccgctctgccggacgccatttataccggaggatatgcaggagagc
ttcaatgagcgcctctggttggcctccgggatttccgatttctacggcgagtactcgccg
attgcggccggtttgtag

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