Ipomoea triloba (trilobed morning glory): 116032874
Help
Entry
116032874 CDS
T07384
Name
(RefSeq) probable sphingolipid transporter spinster homolog 2
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
itr02000
]
116032874
Transporters [BR:
itr02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
116032874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
MFS_3
Motif
Other DBs
NCBI-GeneID:
116032874
NCBI-ProteinID:
XP_031131473
LinkDB
All DBs
Position
10:27839169..27844504
Genome browser
AA seq
501 aa
AA seq
DB search
MALAPTPSLLAPQPSWFTPKRLLAIFCAINLLNYVDRGAIASNGVNGSPRSCSDSGTCSS
GSGIQGDFNLNNFQDGVISSAFMVGLLVASPIFASLAKSVNPFRLIGVGLTVWTLATAGC
GFSFDFWSITIFRMFVGVGEASFISLAAPFIDDNAPVEQKTAWLGIFYMCIPSGIAVGYV
YGGLVGSYLTWHWAFWIEALLMLPFAILGFVMKPLQLKGFSHTEPEKALISVETDCLGDE
VASIGKDGSIEATKASRSSDADSYSDHLMRVLKDMKCLLVERVYVVNVLGYIAYNFVIGA
YSYWGPKAGYSIYHMSNADLLFGGVTIVCGIFGSLAGGYVLDLMNSTLTNAFKLLSVATF
LGAIFCFAAFCFKSLYAFIVLFAIGELLVFATQGPVNYVCLHSVKPSLRPLSMAISTVSI
HIFGDVPSSPLVGVLQDHINDWRISALVLTSVLFLASGIWFIGIFLHSVDRFNEDSEHSI
PIPDRSSTTPLLEENSAERSV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctttagctccaactccttcgttactagctccccaaccttcctggttcactcccaaa
aggttgcttgcaattttctgcgcaatcaacttactaaattatgtggaccgtggagctata
gcaagcaatggtgtcaatgggagccctagaagttgtagtgatagtggtacatgttcatct
ggcagtggaattcagggcgattttaacttgaacaattttcaggatggtgtcatatcatct
gctttcatggttgggctacttgtggcatctccaatatttgcatccttggcgaaaagtgtg
aatccatttaggcttattggagttggactgacagtctggaccttggcaactgccggttgt
ggattttcgtttgacttctggtcaattacaatattccggatgtttgtaggtgttggtgaa
gcttcttttattagtcttgccgctccattcattgatgataatgccccagttgagcagaaa
acagcatggctgggaatattctacatgtgcattccatctgggattgcagttggctatgtc
tatggtggattggttggatcttatcttacttggcattgggccttttggattgaagcttta
ttgatgcttccttttgctattctaggttttgtaatgaaaccattacaattgaaagggttc
tctcacactgaaccagaaaaggcattgatttctgtggagactgattgcttaggagatgaa
gttgcttcgattggtaaagatggttccattgaagccaccaaagcttccaggtcaagcgat
gctgatagttattcagatcatctcatgagagttttgaaagatatgaaatgtcttttggtt
gaaagggtttatgttgtgaatgtgctaggatatatagcgtataattttgtaataggtgca
tactcttattggggaccaaaggctggttacagcatatatcatatgagcaatgcggatttg
ctctttggaggagttacaattgtatgtggaatatttggatcactagccggtggctatgtt
ttggatctcatgaattctacactaactaatgctttcaagcttctgtctgtagcaacattt
ttaggggcaatattttgctttgctgccttttgctttaaaagcttatatgcttttatagtt
ctgtttgcgattggagaactgctcgtgtttgccactcagggtcccgtaaattatgtctgt
ctgcatagcgtcaagccaagtttgagaccattatccatggctatatctactgtctcgatt
cacatatttggagacgttccttcatctcctcttgtcggggttctccaggatcatataaac
gactggagaatcagcgctttggtcttgacgtctgttctgtttctggcatccggaatatgg
ttcatagggatctttcttcacagtgttgacagattcaatgaagatagtgagcattcaatc
cccatacctgatagatcaagcacaacaccacttcttgaggaaaatagtgcagaaagaagt
gtataa
DBGET
integrated database retrieval system
