Ipomoea triloba (trilobed morning glory): 116032876
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Entry
116032876 CDS
T07384
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
itr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116032876
03015 mRNA surveillance pathway
116032876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116032876
03041 Spliceosome [BR:
itr03041
]
116032876
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116032876
Spliceosome [BR:
itr03041
]
Complex C
Other components
EJC/TREX
116032876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Lipid_bd
Motif
Other DBs
NCBI-GeneID:
116032876
NCBI-ProteinID:
XP_031131476
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All DBs
Position
10:27317300..27320871
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AA seq
421 aa
AA seq
DB search
MASAVAEKTEEELRKEIDELNRQRREITERLRDPRGIRRGGFTGSGPRNFVANGGRQRGL
VRPAERNDAEDQPTPKKRLLSTVVKIEDGEIVEDTPETPKEMKKDSIYEESSGKTIATQG
ESKPGTWSRRDGNQRTFKMGSDIPPPEHVPRVLPKDEDPKLVSRNKRMLGQLLGTLEKFR
KEDMQLSGSEAYMRRSDSLKRAEQKAREESERLRQQEREQIVEKRKRDLTLRARIAAKAE
EKRMELLFLKWSEHKKKLGNFIRTEAVPPIYYTFAKPLDEDTSVTEQKKEQIFQEWKAAR
REELSQYQKQIGEEYVLNVEKELERWQNGRRGRRPNNNTAANLQETMDKELETHRLEHGP
KTRKIPGSDNNEDEEDVEDINVGEDDMMDDVLGVDENNQRGDETAKPEVANGSPQLENQG
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgccgtcgcggagaagacggaggaggagctgcgaaaggaaattgatgaactc
aatcgtcaacgacgcgagataactgaacggcttcgcgatccaagaggtattcgccgcggt
ggatttaccggctcaggtcctcggaatttcgtcgccaacggcggccgccagcgtggcctt
gtgagaccggccgagaggaatgatgctgaggatcagccgacgccaaaaaagagattattg
tctacagttgttaagattgaagatggggagattgtggaggacactcctgaaactcccaaa
gagatgaagaaggactctatttatgaagaaagctcaggaaaaacaattgcaacacagggt
gagagcaagccaggaacctggtctaggagggatggaaatcaaaggaccttcaagatgggc
tctgatattcctccgccagagcatgttccaagagtgttgccaaaagatgaagatcctaaa
ttggttagtagaaataagagaatgctgggccaacttctggggacattagagaaattcagg
aaagaagacatgcaactttctggctctgaagcatatatgcggaggtcagactctttgaaa
agggctgagcagaaggcacgtgaagaaagtgaaagattaaggcagcaggagcgagaacag
atagtggaaaaacgaaaaagagatctgactcttagagctcgcattgctgctaaggccgag
gaaaagagaatggaattgttatttcttaagtggagtgagcacaagaaaaaactaggcaat
tttataaggacagaagcagtgcctccaatatattacacgtttgccaaaccactggatgaa
gatacttctgtaactgagcagaaaaaagaacagatattccaagagtggaaagctgctagg
agggaggaattgtcccaatatcagaagcaaattggtgaagaatacgtcttgaatgttgag
aaagagctggagagatggcaaaatggtcgaagaggcaggagaccaaacaacaatacggcc
gcgaatctccaagagacaatggacaaggaacttgaaacccataggcttgaacatggacca
aagaccagaaagatccctggcagtgataacaatgaagatgaggaagatgttgaagatatt
aatgttggggaggatgacatgatggatgatgtacttggtgttgacgagaacaatcagagg
ggtgatgaaactgcaaaaccagaagtagcgaatggtagtccacagctggagaaccagggt
cagtag
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