Ipomoea triloba (trilobed morning glory): 116033143
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Entry
116033143 CDS
T07384
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Module
itr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116033143
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
116033143
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
DUF4135
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116033143
NCBI-ProteinID:
XP_031131762
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Position
10:3795435..3819096
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AA seq
388 aa
AA seq
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MDTIIYCAFTFVLFLLAHLGGSADIKVAAKAGVDISPELLKAKAWTEACAATTPSTIVIP
KGTFEMKQALLKGPCKAPVELQIQATLKAPPNPNDMDGKREWLTVEYVDHFTLSGGGTLD
GQGNVQVYAAKDKGFKSDKLPNNLSFNFMKNSVIRDITTLNSKLFHVNVFGGNNLTFEKF
TVKAPADSPNTDGIHIAKIKDVTVKDSVIGTGDDCISIGDGLENLHITGVTCGPGHGISV
GSLGKTPGEEPVKGVFVKDSKFVGTDNGVRIKTWPNSHPGVVTDIHYENIDMKDVKNPIV
IDQEYCPNNECSKQKPSLVKISKVSYRNIKGTSATEEAVILACSSGVPCEGVEIGEINLT
FKGGAAKSLCSNVKPTLTGKQVPAVTCK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatacaataatttattgtgccttcacatttgtattattcttactagcacatcttgga
gggagtgctgatatcaaagttgcggcaaaagccggtgtagatattagtccggaattgttg
aaagcgaaagcttggacagaagcatgtgcagctacaactcccagcaccattgtgatccca
aaaggcactttcgaaatgaaacaagctctacttaagggtccatgcaaagccccagttgag
ctccaaattcaggctaccttgaaggcccctcctaatcctaatgatatggatggcaaaagg
gaatggctaaccgttgaatacgtagatcatttcacactctcgggtggtggcactcttgat
ggccaaggaaatgtacaagtttatgccgctaaagacaaaggttttaaaagtgataagttg
cctaacaatttgagcttcaatttcatgaaaaattcggtcatccgagacataactactcta
aacagtaaattattccacgtcaatgtttttggtggcaataacttaacgtttgagaagttc
actgttaaagcgccagcggatagtcccaatacagatggaattcatattgcaaaaataaag
gatgttacggttaaagattctgttataggaactggagacgattgcatatccattggtgat
gggctagaaaaccttcacatcactggtgtgacatgtgggccagggcacggcatcagtgtg
ggaagccttggcaagaccccgggtgaagagcctgtgaagggtgtctttgtaaaagactcc
aaatttgttggtacagataacggtgtcagaattaaaacatggcctaattctcatcctgga
gtcgtaactgatatacattatgagaatatagatatgaaagacgtcaaaaatccaattgtg
attgatcaagaatactgcccaaataacgaatgctcaaaacagaaaccgtcactcgtaaag
ataagtaaggtaagctataggaacataaaaggtacttctgcaacagaggaagcggtgatc
cttgcatgcagtagtggggtgccatgtgaaggagttgaaattggtgaaattaatttgaca
ttcaaaggaggagctgcaaagtctctttgttcaaatgtgaaacctacattgaccggaaag
caagttcccgcagtgacttgcaaatga
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