Ipomoea triloba (trilobed morning glory): 116033316
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Entry
116033316 CDS
T07384
Name
(RefSeq) high mobility group B protein 13-like
KO
K09273
upstream-binding transcription factor
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
itr03000
]
116033316
03021 Transcription machinery [BR:
itr03021
]
116033316
Transcription factors [BR:
itr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
116033316
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
116033316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Tweety
Motif
Other DBs
NCBI-GeneID:
116033316
NCBI-ProteinID:
XP_031131928
LinkDB
All DBs
Position
10:22403333..22406030
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AA seq
496 aa
AA seq
DB search
PSLLLRALLKAMADIAAVEAIPAKKGKSRKALKNQKASSSEANIMAASVSEDAPDAAIPV
GESAEKENCEGLCQKNSKKGASKAKKQTEELSSFEKEIQEMQEKLQQLKIEKEQTEELLK
AKEEMLIQKEKEQEKLQTELKKLQKIKEFKPNLNFPITKGDKDQEKKGKKGNDPAKKRPA
TAYLLWCKDQWNEVKKENPKAEFKEISNMLAAKWKTISADEKKPYEEKYQSEKEVYLKIV
GNEKREQEALRLWDEEEKQKTALDLLDQYIQFQQESESENKKKKKEKDPLKPKHPLSAFF
LFSNERRAALLAENKNVKEVAKIAGEEWRNMTDEQKAPYEEGAMRNKEQYAKEMEIYRKN
KEEEAANSKKEDDEMDKLRKHEAMQLLKKKEKAENLIKKTKEEQKKKQKEEKNTDPNKPK
KPATSYLLFSKEERKKIAEEKPGTNNSTVTALISVKWKEMSEEDKQVWNNMAAEAMEAYK
KELEEYNKAKEQNNNN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
ccatctctccttctccgagctctcttaaaagccatggcggatattgctgcagttgaagcg
attccggcgaagaaaggaaaatccagaaaagcattgaagaatcagaaggcttcatcgagt
gaggccaatataatggccgcctcagtctccgaagacgcacccgatgctgcaattccggtg
ggagaatccgctgaaaaagagaactgcgagggcctttgccagaagaattcgaagaaaggg
gcgtccaaggcgaaaaagcaaacagaagagttgtcttcatttgagaaggaaatccaggaa
atgcaggaaaagcttcagcagttgaagattgaaaaggagcagactgaggagctgttgaag
gccaaagaggaaatgttaatacagaaggagaaagaacaagagaagctacagacggaactc
aagaaattgcagaaaatcaaggagtttaaacctaatctcaactttccaattacaaaggga
gacaaagatcaagagaaaaaggggaagaaagggaatgatcctgcaaagaaaaggccagcc
acagcttatcttttgtggtgcaaagaccaatggaatgaggtaaagaaagagaacccaaaa
gctgagttcaaggagataagtaatatgttggcggcgaaatggaagacgattagcgctgat
gaaaagaagccatacgaggagaaataccagtctgagaaggaggtatacttgaagattgtt
ggaaatgagaagcgcgaacaagaagcgctgaggctatgggatgaagaggagaagcagaag
actgccctggatttgcttgatcaatatattcagttccagcaagaatcagagagcgaaaac
aagaagaaaaagaaggagaaggatccactgaagccgaagcatccattgtcagcttttttc
ttgttttcaaatgagcgccgtgctgctcttctggctgaaaacaagaatgttaaggaggtg
gcaaagattgcaggtgaagaatggaggaacatgacagatgaacagaaagcaccttatgaa
gagggggcaatgaggaacaaggagcagtatgctaaagaaatggagatctaccggaaaaac
aaagaagaagaagctgcaaacagcaagaaggaagatgacgaaatggataaacttaggaag
catgaagcaatgcaattgctgaaaaagaaggaaaaagctgaaaatctcataaagaaaact
aaagaagagcagaagaaaaagcaaaaggaagagaaaaacactgatcctaacaagccaaag
aagcctgcaacttcatacctcctattcagcaaggaggagaggaagaagatagcagaagag
aagcctggaaccaacaactctactgttactgcactcatttcagtcaagtggaaggagatg
agtgaagaagataaacaagtgtggaacaacatggctgcagaagcaatggaggcatacaag
aaggaactggaggaatacaacaaggcaaaggagcagaacaacaacaactga
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