Ipomoea triloba (trilobed morning glory): 116033681
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Entry
116033681 CDS
T07384
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00100
Steroid biosynthesis
itr00909
Sesquiterpenoid and triterpenoid biosynthesis
itr01100
Metabolic pathways
itr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
116033681
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
116033681
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
itr01006
]
116033681
Enzymes [BR:
itr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
116033681
Prenyltransferases [BR:
itr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
116033681
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
116033681
NCBI-ProteinID:
XP_031132297
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All DBs
Position
10:28722112..28726602
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AA seq
415 aa
AA seq
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MGLLWEMLKHPDEVYPLIKLKMEARKVMGKQIPPQPHWGFCFTILPKVSISTTLAIQKLP
KQLRGPVCIFYLVLRALDTVEDDTSIATEVKVPILLDFHRHIYDREWHFSCDCTKKYYKV
LMDNFHHVSTAFLKLEKPYQEVIEDITKRMGRGMAKFIGKEVETIDDFDEYCHYAAGLVG
IGLSRLFHTAWKEDLASDSLSNSMGLFLQKTNVIRDYLEDINETPKCRMFWPRQIWSKYV
DKLEELKYEENSVEAVQCLNEMVTNALSHVEDCLIYMSAIRNPSILMFCAIPQMMSMGTL
AMCYNNIQVFRGIVQIRLGLTAKIIDQAKTMEDVYKVFYDFSCMIRSKVDINDPNASMTL
ERLEIIMKTCRESGALNNRKSYILSSQPNYTRSDLMAVLFIIIVAIIFLGYPSEN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggggcttttgtgggagatgttaaagcatccggacgaggtgtacccgctgataaagcta
aagatggaagcgaggaaggtgatggggaagcagattccgccgcagcctcactggggattc
tgcttcactatactcccaaaggtctctataagcaccactcttgctatccagaagcttcct
aaacagcttcgcggccctgtgtgcattttttatttggttcttcgagcacttgacactgtg
gaggatgatacaagcatagccacagaggttaaagtacctatactgctggactttcatcgt
cacatatatgaccgcgaatggcatttctcgtgtgattgtactaaaaagtactataaagtt
cttatggacaatttccatcatgtttccactgcttttctgaaacttgagaaaccttatcag
gaagtaattgaagatattacaaagagaatgggtagggggatggcaaagtttataggcaaa
gaggttgaaacaattgatgattttgatgaatattgtcattatgctgctgggcttgttgga
ataggtttgtcaagactttttcataccgcttggaaagaagatttagcttcagattctctc
tccaattctatgggtctgttccttcagaaaacaaacgttattagggattatctggaggat
attaatgagacaccaaagtgtcgaatgttttggccccgccagatttggagtaaatacgtc
gacaaacttgaggagttgaaatatgaagagaactcagtggaggcagtacaatgtctgaat
gaaatggttacaaatgctttatcacacgtggaagattgtttgatttacatgtccgctatc
cggaatccttctatccttatgttttgcgctattccacagatgatgtccatgggaacatta
gccatgtgctacaataacattcaagtcttcaggggcattgtgcagataagacttggtctt
actgctaagattattgatcaggctaagacaatggaagatgtctataaagttttttacgat
ttttcttgtatgataagatcaaaggttgacatcaacgatccaaatgcttccatgactttg
gagaggcttgaaataattatgaagacttgtagggagtctggagccctaaacaacaggaaa
tcttacattctgagttcccaacctaattacacccgatctgatctgatggctgttctcttt
atcattattgtggctattatttttcttggatatccttcggagaattga
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