Ipomoea triloba (trilobed morning glory): 116033970
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Entry
116033970 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116033970
KO
K10756
replication factor C subunit 3/5
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03030
DNA replication
itr03410
Base excision repair
itr03420
Nucleotide excision repair
itr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116033970
03410 Base excision repair
116033970
03420 Nucleotide excision repair
116033970
03430 Mismatch repair
116033970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116033970
03036 Chromosome and associated proteins [BR:
itr03036
]
116033970
03400 DNA repair and recombination proteins [BR:
itr03400
]
116033970
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116033970
DNA Replication Termination Factors
ELG1-RFC complex
116033970
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116033970
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116033970
Check point factors
HRAD17(Rad24)-RFC complex
116033970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
DNA_pol3_delta2
RFC_C
RuvB_N
Mst1_SARAH
EnY2
Motif
Other DBs
NCBI-GeneID:
116033970
NCBI-ProteinID:
XP_031132387
LinkDB
All DBs
Position
11:complement(882475..885525)
Genome browser
AA seq
711 aa
AA seq
DB search
MCCQLASFHPPSLSPKTIPQSTLSFLFPNQKQKKTVNLITSCCSMSSPSIPRCKSVPSIP
DAAKHSPSSSDTHAASVKTSKSAESIASALQKITRKKWKPSSSSSKNSNLTVENLKEFDR
RNEVREGKREPSSPYYRGLTDQKIGIEKQKLAESSPLRESFSVAMSSRSFVKIQERRNTR
FVAKETSLARTQVKSRKTGNEQEMKEIHGHNSSRTDLYTLFSKEKPMREKISETTQSQST
KTRKEQGKKQEIHHSSRTGLNASMGKEKSLRERVSEQLPPPITAPSLPQQLPEPLPASRP
SLPSPPPTPLVQAPEQEKELSPPPNQEKSIAEVDETVAEENEIKFIWADKHRPQALKDFL
CNRDMALELQALAKNHCDKHFIFEGPPGVGKRTMIFALLHEVFGPDKVQAREECQVLSLK
GESVPSIQVNVKVSMRHIEINLSETKGYEQHVIVELIRGKTNKLSGIPFPRNQADYKAII
ICEAEKLSTDSLLYIKWILEKYKGSYKVFFCCSDASKLQPIKSTCKVVQLRSPSNEEIIN
VLEFIAKQEGVELPRPLAEKFANSAKRNLRQAIRSFEATWHHNSLLKEDQEIMNGWEDDI
AKIARNIIEEQSPRQLYEIRRKLQNLIEHNVSAEFIFYTLGEELKKNLDKQLQNDIDNLQ
QKYKSQLNGEESGNIHNDPLRQTVQQFMKIEEFIAKFMSWYKTNVVKKGKR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgtcaattggcttcattccatcccccatcactatcaccaaagactatcccacag
tccacactatcctttctattcccaaaccagaaacagaaaaaaactgtgaatctcatcacc
tcttgttgttcaatgtcgagtccctcgatcccgcgatgcaaatccgttcccagcatccca
gatgctgctaaacactccccctcgagctcggacacgcatgcagcctcagtcaagacctcg
aaatcggccgagtccattgcctcggccctgcaaaagatcacaagaaagaaatggaaacca
tcttcttcttcttccaagaactccaatctgacagtggagaacctgaaggagtttgacagg
agaaatgaggttagagaggggaagagagagccttccagcccttattacagagggctcaca
gaccaaaagattgggattgagaaacagaaactggcagaatcaagtcccctcagggaatct
ttctcagtggctatgagttccaggagttttgttaagattcaggagcggcgaaatacgagg
tttgtggctaaggaaacatcattggcaagaacacaggttaagagcagaaaaacaggaaat
gaacaagaaatgaaagaaattcatggtcacaattctagtaggactgatctttacactttg
ttcagtaaagagaagcccatgagggagaaaatatcagaaacaacacaatcccagagcaca
aaaactcgaaaagaacaaggtaaaaagcaggagattcaccacagttccaggacaggcctt
aacgcttcgatgggtaaggagaagtccttgagggagagagtatcagaacagctaccaccg
ccaatcaccgccccatcattgccacaacagctgcccgagccattgcccgcctcacgccca
tcactgccatctccaccaccaacgccactcgtgcaggcacctgagcaagaaaaagaatta
tctccacctccaaatcaggaaaaatccattgcagaagtggacgaaacagttgcagaggaa
aacgaaattaagttcatctgggcagacaagcacagaccacaagctctgaaagatttcctg
tgcaacagagatatggcacttgagctacaagccttggcaaaaaaccattgtgataagcat
ttcatatttgaagggccacccggagtgggaaagagaacgatgatttttgcactgcttcac
gaagtttttggcccggataaagtacaggctagagaggaatgccaggtattgtctttaaag
ggcgaatcagtgccaagcatccaagtaaacgtaaaggtatcaatgaggcacattgagatc
aatctctctgaaactaaaggctatgagcagcatgtcattgttgaacttatcagagggaaa
actaacaagctctccggtataccattcccacgcaatcaagcagactacaaagcaatcata
atctgcgaggcagaaaagctatcaacagattcgctgctttatatcaaatggatattggag
aagtataaaggcagttataaagtgttcttttgttgcagtgatgcatcaaaactccagcct
ataaagtcgacttgcaaagttgttcaactccgctcaccttcaaacgaagagattatcaat
gttttggaattcatagctaaacaggaaggagtcgagcttccacgcccactagcagaaaaa
tttgccaacagtgcaaaaagaaatttaagacaggccatacgatcattcgaagcaacctgg
caccacaattctttgctgaaggaagatcaagaaatcatgaatgggtgggaggacgatatt
gcaaagattgccagaaatataattgaagagcaaagcccaagacagctttatgaaatccgc
aggaaacttcagaatctgatagagcacaacgtttctgcagagttcattttttatactctg
ggagaagagctaaagaagaacttggacaagcagttacagaatgacatagacaatctacag
cagaaatacaaaagccagttgaacggtgaggaatcgggtaacatacataatgatccatta
cgacagactgtgcagcagtttatgaagattgaagaattcatagcaaagttcatgagctgg
tacaagactaatgtagtgaagaaagggaagcgctga
DBGET
integrated database retrieval system
