Ips typographus (European spruce bark beetle): 145728982
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Entry
145728982 CDS
T11912
Symbol
Fen1
Name
(RefSeq) flap structure-specific endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity03030
DNA replication
ity03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
145728982 (Fen1)
03410 Base excision repair
145728982 (Fen1)
03450 Non-homologous end-joining
145728982 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ity03032
]
145728982 (Fen1)
03400 DNA repair and recombination proteins [BR:
ity03400
]
145728982 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ity04147
]
145728982 (Fen1)
DNA replication proteins [BR:
ity03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
145728982 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
145728982 (Fen1)
DNA repair and recombination proteins [BR:
ity03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
145728982 (Fen1)
Exosome [BR:
ity04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
145728982 (Fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
DUF2458
Ribosomal_L29e
Motif
Other DBs
NCBI-GeneID:
145728982
NCBI-ProteinID:
XP_081835693
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All DBs
Position
LG5:complement(14270179..14271728)
Genome browser
AA seq
378 aa
AA seq
DB search
MGILNLAKFLADVAPHCIKETEIKTYFGRKVAIDASMSLYQFLIAVRSDGAQLTTADGET
TSHLVGTFYRTIRLLEHGIKPVYVFDGKPPEMKGGELNKRMEKRAEAQKALDKAMEAGDQ
AEVDKFNRRLVKVTKQHSDEAKELLKLMGVPYIEAPCEAEAQCATMVKAGKIFATATEDM
DALTFGSDIVLRHLTFSEARKMPIQEIHLKLVLEALNLTQEEFIDFCILMGCDYTDSIRG
IGPKKAIELIKKHRNIETILSNIDQSKYPPPENWNYKGARDLFVSPEVADPEGIELKWTE
PDEEGVVKFLCGHRQFSEDRVRNGIKKLQKARGTSTQARLDGFFTVLGTTPAKRKAEDKK
KNTPNKRGKSGAGRGRPK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgggtattctaaatttggctaaatttttggctgatgtggcaccccactgcattaaagaa
accgagattaaaacctacttcggtcgaaaagtggcgatagacgcgtccatgtccctatac
cagtttttaatcgctgtgcgatcagacggggctcaattgaccacagcagatggggagact
acatcccacttggtcggcaccttttatcggacaatacgattgttggagcatggtatcaag
ccagtttatgtatttgatggcaagccccctgagatgaaaggcggggagttgaataaaaga
atggagaaaagggctgaggctcaaaaggctttagataaagccatggaggcaggtgatcaa
gctgaagtggacaaattcaacaggaggctagttaaagtaacaaaacagcattctgatgag
gctaaagagttgctgaaactgatgggggtaccctacatagaggctccttgtgaggctgaa
gctcaatgcgccaccatggtgaaagctggcaaaatatttgctactgcaactgaggatatg
gatgctctaacttttggttctgatatagttttaaggcatttgactttcagtgaagcccgt
aaaatgcccatacaagaaatccacttaaaattggtgttggaggctttgaatctcactcaa
gaagagtttattgacttttgtattttaatggggtgtgactacactgatagcatcagaggt
attggaccaaaaaaggctatagaactgataaaaaaacatagaaatattgaaactatcttg
agcaatattgatcagtccaagtatcccccgccagaaaactggaattacaaaggggctagg
gatttgtttgtcagtccagaggttgcagaccctgaaggcattgagttgaaatggactgag
ccagacgaagagggcgtggtcaaatttttgtgcggacacaggcagtttagtgaagaccga
gtccggaacggaattaaaaaattgcagaaagcccggggtactagcacccaagctcgattg
gacggatttttcacagtgttgggcaccacgcccgccaaacgtaaagctgaagataaaaag
aagaatactccgaataaaaggggcaaatcgggtgccggtagaggccgcccaaagtaa
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