Ips typographus (European spruce bark beetle): 145730172
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Entry
145730172 CDS
T11912
Symbol
Sur-8
Name
(RefSeq) leucine-rich repeat protein shoc-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
145730172 (Sur-8)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_13
LRR_NLRC4
LRR_R13L1-DRL21
LRR_LRWD1
LRR_5
Motif
Other DBs
NCBI-GeneID:
145730172
NCBI-ProteinID:
XP_081837354
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All DBs
Position
LG6:complement(3550163..3555403)
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AA seq
561 aa
AA seq
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MHHSNLPEDNMLEAESASGVEHGKQKKFSSGSLSGDMSRPKVVTVKHPDSNKLKPTSKKN
KTPIQADLDVSKEFIRCREECLKRLDLSKSNITHLPQTIRDLTNLEELYLYGNKLVQLPV
EIGSLTGLHMLALSENSLTSLPDSLENLKSLKVLDLRHNKLNDIPEVVYKLTSLTTLYLR
FNRIRYVGEEISNLTSLVMFSLRENKIRELPAGIGCLVNLGTFDVSHNHLEHLPEEIGNC
TNLSTLDLQHNELLDIPESIGNIQTLTRLGLRYNRLTSIPSSLSKCREMEDFNVEGNAIG
QLPDGLLSSLNKLTSITLSRNNFSAFPSGGPSQFTDVDSVNLEHNQIDKIPYGIFSRAKR
LTKLNMKENQLTSLPLDVGTWVNMVELNLGTNQLIKLPEDIQCLQALEVLVLSNNLLKRI
PPNIGNLRKLRVLDLEENRLEQLPNEIGYLRDLQKLIVQSNQLTQLPRAIGHLSNLVFLS
VGENNLSYLPEEIGTLENLESLYVNDNPTLHNLPFELALCSNLQIMSIENCPLSQIPAEI
VAGGPSLVIQYLKMQGPYRAM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcaccattctaatttgcctgaagataacatgttggaagcagagtcagctagtggagtg
gaacatggaaagcaaaagaaattcagttctgggtctctcagtggggatatgtccagaccg
aaagtggttactgtaaaacaccctgattccaacaaacttaaacccacttcaaaaaagaac
aaaacaccaattcaagcagatcttgatgtgagcaaagagtttattcgctgtagagaagaa
tgtttgaaaaggttggacttgagtaagtcaaatattactcaccttcctcaaacaataaga
gatttaaccaacttggaagaactttatttatatggtaacaaattagttcaactgccagta
gaaattggtagtttgactggattacatatgctagctttaagtgaaaattcattaactagc
ctgccagattctctggaaaatttaaagtctttaaaagttctagatctaagacacaataaa
ctcaatgatattcctgaagtggtgtataaattaacatctttaacaacactatatttgaga
tttaaccgaatcagatatgttggggaagagataagtaacctaacatctttggtcatgttc
agtttgagagaaaacaaaataagagagctgccagctggtataggatgtctggtcaatctt
ggtacatttgatgtgtctcacaatcatctggaacatctgcctgaagaaataggaaactgt
acaaatcttagtactcttgatttacaacacaatgaactacttgacatccctgaatcaatt
ggaaacattcagactctcaccaggcttggtttaagatacaacagacttacctcaataccc
tcaagtttaagtaaatgcagggaaatggaagacttcaatgtagaaggcaatgcaatagga
caactgccagatggattgctctctagtttaaacaaactaaccagtattactctgtcacgc
aacaacttttcagcttttccctcaggaggtccatctcaattcacagatgtagattctgtt
aatttagagcataatcagattgacaaaattccatatgggatattttcaagagcaaaacgt
ttgacaaaacttaacatgaaagagaatcaattgacttctcttcctttggatgttggaacc
tgggttaatatggttgaattaaatttaggtaccaatcagctgatcaaactcccagaagat
atccaatgtctacaagctttagaagtcttagtgctatcaaataaccttctgaagcgaatt
cctccgaacatcggcaatctcagaaaacttagagttctcgacttagaggagaatcgtctt
gaacaacttcccaacgaaatcgggtaccttcgcgacttgcaaaagttgattgtacaatcg
aaccagctgactcaattaccccgtgccatcggtcatctcagtaacttagttttccttagc
gtaggagaaaacaatctgagttatctgcctgaagaaatcggcactttagaaaatttggag
tcactttacgtaaacgacaatcccactttgcacaatttgccattcgaattggcgctttgc
tccaatttacaaattatgagcatcgaaaattgtcctctgtcacagatcccagcagaaatc
gtggctggcggcccatctttggtgattcaataccttaaaatgcaaggaccgtacagggct
atgtga
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