Ips typographus (European spruce bark beetle): 145730861
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Entry
145730861 CDS
T11912
Symbol
Bap170
Name
(RefSeq) brahma associated protein 170kD isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
145730861 (Bap170)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ity03000
]
145730861 (Bap170)
03021 Transcription machinery [BR:
ity03021
]
145730861 (Bap170)
03036 Chromosome and associated proteins [BR:
ity03036
]
145730861 (Bap170)
Transcription factors [BR:
ity03000
]
Eukaryotic type
Helix-turn-helix
ARID
145730861 (Bap170)
Transcription machinery [BR:
ity03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
145730861 (Bap170)
Chromosome and associated proteins [BR:
ity03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
145730861 (Bap170)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
145730861
NCBI-ProteinID:
XP_081838460
LinkDB
All DBs
Position
LG6:9713636..9729561
Genome browser
AA seq
1683 aa
AA seq
DB search
MAEILGKDEATYSKERDSFLRDLRIFHDVRGTPFKRCPTLGGKEIDLYLLYTLVTSEGGW
IKVNAKNSWNDFWPHFQLPICVNGSVALKQIYLRYLDRWEKVHYLGEDGDRGSDDDEESR
HKRWSARVLHAVPHAYLYSQHNVTDEKREQHHLDLNVYKPSDYDRLALSLISPLPNEQDF
AINVCTLLSNDNRNNLKLEKHPRIVMYLLAHAGIFNHSFVSGSLRQLFVHIYSEVRKKPI
HNFWNDVLESSEFLDLTNETNFYTLREEDKSCDSLIKDDFLKYAELDKSTGSNEQTCDID
SECEVIEDSLKPPKYFKFKSDPSDRELFCLRRTLGTQDYIGQRVLQIATILRNLCFIEDN
VSVLTNNSSFVRFLLLCCCSQWNALKNLGMDMLGNIAAELELKDVQTDLIASSLLKIISK
NLQSDDRAACLSSVEVLNKLSQNDKNEDMLIRSLESAIYKKVCSFLTIHDVMLLIYTLEC
LYSLSSLGERACNFIASNHGVIDTLVSLVTVEGKSYGPKACIGMKLVETIPSGSQTQAQS
QSTPIPPASPQSDKTSTTNVVVSNTVAGIISSMSNSPPAPSVTPVKVVPSVASTPLRSVT
IAPQRILATPVVVPTSKTETTVLLTPAKPMTTAMPTVTTTTPTVAAPPVSQPLTPQQLIQ
QQHAHQQAIQENEQFALAWLRATYEPSSAVNKVDHQELYKHYINSCSQIGRRGVISPLHF
PRCVRSVFGGTVGPNPMKPANPGDPQFYEGIKVRAQPLKLNVPPPLSPPQPAFNPSPAPP
PKAVVPRRKSKLVVVKTGAASPLAVEAEPETASNASSPSPASPILKAQLSAPPKPRETQV
APGDSKCQAMAHPHLSHVLLSSGSSGSATTASSIKPEIQDTQIVQTGQSNSSSLIKSLLA
TKVNDACLPTVSMRVATTDCQNVAQVVARQQRLLSQQNVDNNPPPKNQSRLEALKMHRIN
GVRQLFSDSEVGDPSVSSTTQFGSTIKGKKEPPQPPPPPLAPLSNNTKSKTPPVVNEDSD
SLSSTSGLAAVGIVSSTEENDNSLTSFEGLLNGMPIVEETLNESSDSKDSVKNPGSEISI
DKPLRLADLLEKKFDKSPTLLNGSLNKDLKLSSERSDLLENHIEKALIRENDIKVEEIKL
EDVEIKQETLDTKGIKRRASEDLDEVDVKKPHLIANVNGTASNDLQAPDSSSPNGEERSS
TVSTAAAKLFADFAADILEDEDEDQLMQDTTQSSQSAPVVETGAGIQPQLIVDNNQQVVL
SQSRQIIVSQPQIHGSNQQVVFSSGTQIKTASGQTVIVNAGMQQRQSVLIQPTNAGQLLL
SQGLQGQVQLVQGTQSGQYVIQTNPSQGCCYVVAQPQTAVVHGQPQTVLLTQQGQNVGSK
TIIILQQQTTGGASHHQKVVVTPQGQQVVVTQVPRPVAQSSSVSNNNVQQTKALRPTPTP
SPALSTASTSSTLSNGLKQEEAPPKIKIIRDLTTPFVCEWGDCVVDTKFKSPNQVYMHAC
EAHCPQDDEEVICQWDRCDSLKRKRFSLMTHLHDKHCNIEAMKHSLVRRKKISQGQNVEP
APVTPTSHPGYAPDAALHAIKRHALEFVNPKELQIKTAKQGGTTTIKVQLPPSDQDDNEG
PVTKSIRLTASLILRNLVIYSSNCKRYLKSYESHLANIALSNVESSRTIAQILYDINDGT
THR
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaatcctcggaaaggacgaggccacgtactccaaggaaagggatagttttttg
agggacttacgcatctttcacgatgtcaggggtactccatttaaaagatgtcctactctt
ggaggaaaagagatcgacctctatctgctttacactttggtgacttcagaaggtggatgg
atcaaggttaatgcaaaaaattcatggaacgacttctggcctcacttccaattgccaatc
tgtgtgaatggttctgttgctctgaaacaaatttatttgagatatttagatcgatgggag
aaggtacattatttaggggaagatggggacagaggcagtgatgacgacgaagagagcaga
cacaagcgctggtccgcacgagtattacacgcggtaccgcacgcctatctttattcccaa
cataatgtaacagatgagaaacgtgaacaacatcatctagacttgaacgtatataaacca
tccgactacgataggctggctctttcattgatatcgccgctgcctaacgaacaggatttc
gccataaacgtttgcaccttactttccaacgataatcggaacaatttgaaattggagaaa
catcctagaattgtcatgtatctgctagctcacgcgggaatcttcaatcacagttttgtt
tcaggctctctgcggcaactgttcgtacatatttatagcgaagtaagaaaaaagcccatt
cacaacttttggaatgacgttctcgaatctagtgaatttttggatctcacaaacgaaact
aacttttacactctgagagaggaagacaaatcctgtgatagtttaatcaaggacgatttt
ctgaaatatgccgagctggataaatcgaccggaagtaacgagcaaacgtgtgatatcgat
agtgagtgtgaagtgattgaagatagcttaaagccgccaaagtatttcaaatttaagtcc
gatccttcggatcgggaactgttttgtctgagacgaactttgggtacccaggattatatc
ggtcagcgagtgttacaaatagctactattctgcggaacctgtgttttatcgaagacaat
gtctccgtgttaacaaataattcgtcgtttgttcgatttctattattgtgttgttgttcg
caatggaacgctttgaaaaatttaggtatggatatgttgggaaacatagcggccgaacta
gaactgaaagacgtacaaacagacctaatcgcgtcatctttgttgaaaataattagtaaa
aacttacagagtgacgatcgtgcagcctgcctctcatcagtagaagtattaaataaacta
agccaaaacgataagaacgaagatatgcttattcgatctttagaatcagccatatataaa
aaagtatgttccttccttacaatacacgacgttatgctactaatttatactttggaatgt
ttgtactcgttatcctcgttgggggagcgggcgtgtaactttatcgcaagcaaccatggg
gttattgacactctggtgtctttggtcactgtggaagggaaaagttacggacccaaagcg
tgcattggaatgaaactggtcgagacgataccgtccggaagtcaaactcaggcccagtca
cagtccactcccattcctccagcgtctcctcagtcggataaaacgtcaacaaccaatgtg
gttgtgtcgaatacggtagctggtattattagttcaatgtccaattcaccacctgcccct
agcgtgacgccagtgaaagtggtgcccagcgttgccagtacccctttgagaagtgtaacg
attgctcctcaacggatactcgctacaccggtggttgttcctacttctaaaacggaaact
accgtacttctaacgccagctaaaccgatgacaacagcaatgccaaccgtcacaacaacc
acgcccactgtggccgctccgcccgtctcgcagcctctcacgcctcaacagctgattcaa
cagcagcacgcccaccagcaagccattcaggaaaatgaacaatttgccttagcgtggctg
agggccacatacgaaccgagcagtgctgtgaacaaagtggatcaccaagagctgtacaag
cattacatcaattcctgttcccaaatcgggcgacgaggagtaatctcgcctctacatttt
cccagatgcgttaggtcagtatttggcgggacggtgggaccgaacccgatgaagccggct
aatccgggagatcctcaattctacgagggaatcaaggtgcgcgcgcaaccacttaaactg
aacgtcccccctccattgtctccgccccagccagcgttcaatccgtctccggcgccgcca
cctaaagcggtggtacctaggcgtaaatccaaattggttgttgtcaaaacgggcgccgcc
tctccgctagctgtcgaggcggaaccggagacggcatcgaacgcgtcgtcgccctctccc
gcttctcccatccttaaagctcagctgagcgctccaccaaagccacgggagacgcaggtc
gctccgggtgattctaaatgtcaggcgatggctcacccgcacctgagccatgtcctgctc
agtagcgggtcgtcggggtcagctacgactgcatcgtcgatcaagccggaaattcaagat
acccagattgtacaaacaggccagagtaatagcagttcgctaattaaaagccttttggcc
actaaggtaaacgatgcatgcttgccaactgtgagcatgagggttgccacaacagactgc
caaaatgtagcccaggtcgtcgcacgacaacaaaggttactgtctcaacaaaacgtcgat
aacaacccgccacctaaaaaccaaagtagactagaagctttaaaaatgcacagaatcaac
ggagtgaggcaattattcagcgacagcgaggtgggagacccttccgtatcctcaaccact
caattcggaagcacgattaagggcaaaaaagaaccgccacagccgccacctcctccgttg
gcgcctctaagcaacaacaccaaatcgaaaactcctcctgtagtgaatgaagatagtgac
tctttgtcgtcgacatcgggccttgccgctgtggggatcgtatcatcgacagaggaaaat
gataattcgttaacgagttttgaaggtttattgaacggtatgccgatagtggaagaaaca
ttgaacgaaagcagcgattccaaagactctgtaaaaaatcctggtagcgaaatcagtatt
gacaaaccgttaaggttggccgatttgctggagaagaaattcgacaagagtccgaccttg
ttgaacgggagtttgaacaaagatctgaaactgagctccgagaggtccgatttgttggag
aaccatatagagaaggctttaattcgagagaacgacatcaaagtcgaagaaataaaactg
gaagacgtggaaatcaaacaggaaactttagataccaaaggaatcaagcgacgcgcctcc
gaagacttggacgaggtcgacgttaaaaaaccccatctaatcgccaacgtgaatggtaca
gccagtaatgatctgcaagcgcccgattcttctagtcctaacggcgaagaacgttcttcc
accgtttcaacagctgccgccaaattgttcgccgattttgccgccgatattctggaagac
gaagacgaggaccagttgatgcaggacacgacgcagtcgagtcaaagtgcccccgttgta
gaaactggtgctggaattcagcctcaacttattgtcgataataatcagcaagtggttttg
tcgcagtctcgacaaattatcgtttcacaacctcaaattcatggctctaaccaacaagtt
gttttttcctcaggaactcaaatcaaaaccgcttcaggccaaactgtaatagtaaacgcc
ggaatgcaacaaagacaatcagtgttgattcagccaactaatgcgggacagttgcttcta
tcgcaaggacttcaaggtcaggtccagctagtccaaggcacgcagagcggacaatatgta
atacaaacaaatccgtctcaaggttgttgttatgtggtagcacagccgcagaccgcagtg
gtgcacggacaaccgcaaacggtgttgctcacccaacaaggacaaaacgtcggatcgaaa
acaattattatattgcaacaacagacgacaggtggtgcttcacatcatcagaaagttgtg
gtaacccctcagggtcagcaagtggtcgttactcaagttcctaggccggtagctcaatcg
tctagtgtttctaataataatgttcaacaaacaaaagcgttgagaccgacgccgacacca
tcgcccgctctaagtacagcttctacatcctcaacgttaagtaacggtttgaaacaagaa
gaggctccacccaaaattaagattatccgtgacctcaccaccccgtttgtatgtgaatgg
ggcgactgtgttgtggataccaaatttaagtctcccaatcaagtgtatatgcacgcttgc
gaggcgcattgtcctcaagatgatgaagaggtgatctgtcagtgggaccgttgtgattcc
ctgaagcggaaaaggttttctctgatgacgcatctacatgataagcactgcaatattgag
gccatgaaacacagcttggtaagacggaaaaagatctcacaaggacagaacgtagagccg
gctcccgttactccaacgtcgcatccgggatacgctcccgatgctgctcttcacgcgatc
aagagacacgcgctcgaatttgttaaccctaaagaattacagatcaaaacggctaagcag
ggcggtactacaacaattaaagttcagctgccgccttcagatcaggatgacaatgaagga
cctgtgacaaaaagcattcgtctaactgcatcgttaatccttcgaaatttggttatttat
agtagcaattgtaaaaggtacttaaaatcgtacgaatcccacttagcaaatatcgcactg
agcaacgtagaatcttcgagaacaatagcacaaatactgtacgacataaatgatggaacg
actcataggtga
DBGET
integrated database retrieval system
