KEGG   Ips typographus (European spruce bark beetle): 145731746
Entry
145731746         CDS       T11912                                 
Symbol
snf
Name
(RefSeq) U1 small nuclear ribonucleoprotein A snf
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
ity  Ips typographus (European spruce bark beetle)
Pathway
ity03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ity00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    145731746 (snf)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ity03041]
    145731746 (snf)
Spliceosome [BR:ity03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    145731746 (snf)
 Complex B
    145731746 (snf)
 Complex C
   U2 SnRNP specific factors
    145731746 (snf)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded DUF4523 RRM_PARP14_3 RRM_10 RRM_MUD2_C xRRM
Other DBs
NCBI-GeneID: 145731746
NCBI-ProteinID: XP_081839803
LinkDB
Position
LG7:4547420..4548486
AA seq 212 aa
MDIRPNNTIYINNLNEKIKKDELKKSLYAIFSQFGQIIDIVALKTLKMRGQAFVIFKEIQ
SSTNALRSMQGFPFYDKPMRIQYSKTDSDVIAKMKGTFQERPKKVKPPTNRDEEAPRKKK
KSKDPNRVAANAEQPPNQILFLTNLPEETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVE
FENELQSASAKDALQGFKITPTHAMKISFAKK
NT seq 639 nt   +upstreamnt  +downstreamnt
atggatatccgaccaaacaacacgatttacatcaacaacctgaatgaaaaaatcaaaaag
gatgagctgaaaaagtctctttacgcaattttctcgcaattcggccaaattatcgatatc
gtggccttaaaaacgttaaaaatgcggggacaagcctttgtaattttcaaggaaatccag
agttcaaccaacgcccttaggtccatgcagggctttcctttttatgacaaacctatgaga
attcagtattctaaaactgactcagatgtcattgctaagatgaaaggtaccttccaagag
agacctaagaaggtgaaaccacccacaaaccgtgatgaagaagctcccagaaagaaaaag
aagagcaaagaccccaatagagtagcagctaatgctgaacagcctcctaaccaaattctg
ttcttgaccaatctcccagaagaaactagtgaaatgatgttgtccatgcttttcaaccag
ttccctggttttaaagaggtgcgtttggtgcccaaccggcatgatattgcctttgttgag
tttgaaaatgaacttcaatctgcatcagccaaggatgctttacaaggctttaaaataaca
ccaacacatgctatgaagatttcatttgcaaagaaataa

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