Ips typographus (European spruce bark beetle): 145732026
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Entry
145732026 CDS
T11912
Symbol
SmD1
Name
(RefSeq) small ribonucleoprotein particle protein SmD1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145732026 (SmD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ity03041
]
145732026 (SmD1)
03032 DNA replication proteins [BR:
ity03032
]
145732026 (SmD1)
Spliceosome [BR:
ity03041
]
Complex A
U1 snRNP components
Sm proteins
145732026 (SmD1)
U2 snRNP components
145732026 (SmD1)
Complex B
U1 snRNP components
145732026 (SmD1)
U4/U6.U5 tri-snRNP components
145732026 (SmD1)
Complex C
U2 snRNP components
145732026 (SmD1)
DNA replication proteins [BR:
ity03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
145732026 (SmD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
AAA_RNF213_3
Gemin7
Hfq
Motif
Other DBs
NCBI-GeneID:
145732026
NCBI-ProteinID:
XP_081840177
LinkDB
All DBs
Position
LG7:complement(2843361..2844305)
Genome browser
AA seq
121 aa
AA seq
DB search
MKLVRFLMKLSHETVTMELKNGTQVHGTITGVDVAMNTHLKAIKMTPKNRNPINLDTLTV
RGNNIRYYILPDSLPLETLLIDDTPKAKAKKKEGARGAARGRGRGRGRGGPRGRGRGRGR
R
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagtacggtttctgatgaagctttcccatgaaacagtcaccatggaactgaaa
aatggcacccaagtgcacggtaccatcacaggggtggacgtggccatgaacactcactta
aaagccatcaaaatgaccccgaaaaataggaatccaatcaatttggacactttaacagtc
agagggaacaatatccgctactacattctgccagacagtttaccattagaaacactgctg
attgatgatactcccaaggctaaagcaaagaaaaaggagggtgctagaggagctgctagg
ggtagaggacgtggtaggggccgtggtgggcctagaggtcgtggtaggggcagaggaagg
agataa
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