KEGG   Ips typographus (European spruce bark beetle): 145732148
Entry
145732148         CDS       T11912                                 
Symbol
tex
Name
(RefSeq) THO complex 3 homolog tex
  KO
K12880  THO complex subunit 3
Organism
ity  Ips typographus (European spruce bark beetle)
Pathway
ity03013  Nucleocytoplasmic transport
ity03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ity00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    145732148 (tex)
  09122 Translation
   03013 Nucleocytoplasmic transport
    145732148 (tex)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ity03019]
    145732148 (tex)
   03041 Spliceosome [BR:ity03041]
    145732148 (tex)
Messenger RNA biogenesis [BR:ity03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     145732148 (tex)
Spliceosome [BR:ity03041]
 Complex C
  Other components
   EJC/TREX
    145732148 (tex)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    145732148 (tex)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st Tricorn_2nd eIF2A Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N DSE1_N Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_Vps41 RMC1_N Beta-prop_WDR35_TULP_N PAC11 WD40_RFWD3 WDR90_beta-prop_4th B-prop_COPA_B_2nd Beta-prop_TEP1_C NBCH_WD40 TRM82_WD Beta-prop_WDR75_1st Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_ELP1_1st Peptidase_S9_N Beta-prop_NUP159_NUP214 Cytochrom_D1 WD_LRWD1 Rav1p_C
Other DBs
NCBI-GeneID: 145732148
NCBI-ProteinID: XP_081840361
LinkDB
Position
LG7:complement(5344390..5345760)
AA seq 322 aa
MKEHTDKIEEFQKYFKTHNKSKEYLGHTSKVHSVGWSCDGKRLASGSFDKCVCIYTLDRD
RLNKETVFKGHGGSVDQLCWHQTNADLLSTASGDKSVRLWDARVQKCVATINTKGENINI
TWSPNGNAIAVGNKEDLVTFIDARTHKIEAEEQFHFEVNEISWNNTSDLFFLTNGQGCIH
ILSYPELKKQHIIKAHPGTCICIEFDPTGKYFATGSADALVSLWDINELACRRVFTRMDW
PVRTISFSHDGQLLASASEDMLIDIGYVETGDKIADVSVEAATFTVAWHPSQYLLAYACD
DKDSYDRKRDAGSLKVWGFPSD
NT seq 969 nt   +upstreamnt  +downstreamnt
atgaaggagcacactgacaagattgaggaatttcagaaatacttcaaaacccacaacaaa
tccaaagaatacttgggtcacacctccaaagttcattcggtaggatggagctgcgacggt
aagcggctagcttctgggtctttcgacaagtgcgtctgcatctacaccctggatagggac
agactgaacaaggaaacagttttcaaagggcacggaggctcggtggaccaactctgctgg
catcagactaacgcggacctactcagcactgccagtggcgacaagtcggtaagactgtgg
gatgctcgagtgcaaaagtgcgtggcaaccataaacacaaaaggggagaacataaatatt
acttggtcacccaatggaaatgctattgcagtaggaaataaagaggatttggtcactttt
attgatgcgcgtacacacaaaattgaggctgaggaacagtttcactttgaagtgaatgaa
atcagttggaataacaccagtgacttgttctttttaactaatggccagggttgcattcat
atattaagttacccagaactaaaaaagcagcacataattaaggcccatcctggaacatgt
atttgtattgagtttgaccctacggggaagtattttgctacaggcagtgctgatgctttg
gtatctttgtgggatattaatgagttggcttgccgccgagtgtttacgcggatggattgg
ccagtgaggaccatttccttcagtcatgatgggcaattattagcctctgcctctgaggac
atgcttatcgatattggttatgtggaaacgggggataagattgctgatgtaagtgtagag
gcggcgacttttacagtggcctggcacccctcacagtacctgttagcttacgcctgcgat
gacaaggacagctacgatagaaaaagggacgccggtagccttaaagtgtggggatttcct
tcagactga

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