Ips typographus (European spruce bark beetle): 145733199
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Entry
145733199 CDS
T11912
Symbol
RpS27A
Name
(RefSeq) ribosomal protein S27A
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity03010
Ribosome
ity04120
Ubiquitin mediated proteolysis
ity04137
Mitophagy - animal
ity04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
145733199 (RpS27A)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
145733199 (RpS27A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
145733199 (RpS27A)
04137 Mitophagy - animal
145733199 (RpS27A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ity03011
]
145733199 (RpS27A)
04121 Ubiquitin system [BR:
ity04121
]
145733199 (RpS27A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ity04147
]
145733199 (RpS27A)
Ribosome [BR:
ity03011
]
Ribosomal proteins
Eukaryotes
Small subunit
145733199 (RpS27A)
Archaea
145733199 (RpS27A)
Ubiquitin system [BR:
ity04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
145733199 (RpS27A)
Exosome [BR:
ity04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
145733199 (RpS27A)
Exosomal proteins of colorectal cancer cells
145733199 (RpS27A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
IBR
TBK1_ULD
OTU1_UBXL
Ubiquitin_5
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
145733199
NCBI-ProteinID:
XP_081842016
LinkDB
All DBs
Position
LG1:28582465..28586262
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKKKKVKLAVLKFYKVDENGKIHRLRRE
CPSDQCGAGVFMAAMEDRHYCGKCGYTLVFSKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaaaactctgaccggcaagaccatcaccctcgaggtcgaaccgtcg
gacaccatcgagaatgtgaaagctaagatccaggacaaggagggtatccccccagaccag
cagcgtctcatcttcgccggcaagcagctggaagacggacgcactctttctgactacaac
atccagaaggagtccacgttgcacttggtgctccgtttgaggggtggcgccaaaaagcgc
aagaagaagaattattctactcccaagaaaatcaagcacaaaaagaagaaggtcaagctt
gccgtactgaaattttataaggttgatgagaatggtaaaatccatagattgaggcgggag
tgtccaagtgaccaatgtggtgctggtgttttcatggccgccatggaagacagacactac
tgcggaaagtgcggttacacgctagtattctctaagccagaggataagtaa
DBGET
integrated database retrieval system
