Ips typographus (European spruce bark beetle): 145733236
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Entry
145733236 CDS
T11912
Symbol
Dbp80
Name
(RefSeq) putative ATP-dependent RNA helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity03013
Nucleocytoplasmic transport
ity03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
145733236 (Dbp80)
03015 mRNA surveillance pathway
145733236 (Dbp80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ity03019
]
145733236 (Dbp80)
Enzymes [BR:
ity01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
145733236 (Dbp80)
Messenger RNA biogenesis [BR:
ity03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
145733236 (Dbp80)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
145733236
NCBI-ProteinID:
XP_081842103
LinkDB
All DBs
Position
LG8:complement(1127253..1130679)
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AA seq
467 aa
AA seq
DB search
MAQKVDWANFVAQTENKLSAITVKDQSPADEKGDENAPDTVNPGEASLLSKIIRKGLVED
KTNIEVQRKDPKSPLYSVKTFEALNLKPNLLKGVYGMGFNAPSKIQEAALPTLLADPYQN
LIAQAQSGTGKTAAFVLAMLSRVDPTQAYPQVLCLSPTYELAIQTGEAATHMSRFCPEIE
LRFAVRGEEVPRGTKLTEHIIIGTPGKVLDWVTKFKVFDIKKIKVFVLDEADVMIAQQGH
QDQCIRIHKQLSPNCQMMFFSATYSQEIMDFAEHIVPNPVIIRLKREEESLDNIGQYYVR
CNSPEDKYNAITNIYGTLGIGQAIIFCHTRATAAWLAEKMSKDGHAVAVLTGDLTVQQRI
DVLDRFRESKEKVLITTNVLSRGIDVEQVTIVVNFDLPIDHVTGEADCETYLHRIGRTGR
FGKKGIAINLVDSDNSMRILKTIEEHFGKKILYLNAEDCDEIEKIGQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaaagtagactgggcgaactttgtcgctcaaactgaaaacaaactttctgca
attacggtaaaagaccagagccctgccgacgaaaaaggggatgaaaatgcccctgacact
gtcaatcctggcgaggccagtctactgtctaaaatcatcagaaaaggtctggttgaggac
aaaaccaacattgaggtacaaagaaaggaccccaagtcacccttgtattctgtcaagact
tttgaagccttaaatttgaaaccaaacttattgaaaggggtatatggtatggggtttaat
gctccttcaaaaatacaagaagcagctcttcccacactattggcagatccctatcaaaat
ttgatcgctcaagcccaatctggaactggaaaaacagctgcttttgtattggccatgtta
agcagggttgaccccacacaagcttacccacaggtgttatgcttgtctcccacctatgag
ttagcaattcaaactggagaagcagccactcacatgtccagattttgtcctgaaattgaa
ttgaggtttgctgttcgaggagaagaagtacccagaggcactaaactgacagaacacata
ataattggaacgcctggaaaagtgttggattgggtcacaaaatttaaagtgtttgacatt
aaaaagattaaagtctttgtcctggatgaagctgacgtcatgattgcccaacagggtcac
caggatcagtgtataagaatccacaaacagctcagtcccaattgccagatgatgtttttt
tcagccacatattcgcaagaaataatggatttcgccgaacatatcgtgccgaatccggtg
ataattcggctgaaacgcgaagaagaaagtctggacaacattggccagtactacgtgcgt
tgcaactcgcccgaagacaaatacaacgcgatcacaaacatttacggcactttgggaatc
ggccaagcaatcatattttgtcacacgcgagctactgccgcgtggttggcggaaaaaatg
tcaaaagacggtcacgctgttgccgttttgactggcgatctcaccgtccaacagcgaatc
gatgtgttggatcgatttagggaaagcaaagaaaaagtgctgattaccaccaatgtactg
tccagaggaatcgacgtggaacaagtgacaatcgttgtcaactttgacctgccaatcgat
cacgtgaccggcgaggcggattgcgaaacttacctgcaccggataggacggaccggacgt
ttcggtaaaaagggcatcgccatcaacctggtcgattccgacaattcgatgcgaattttg
aaaaccattgaggaacatttcggcaagaaaattttatatttgaacgcggaagattgcgac
gaaattgaaaaaatcggccagtaa
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