Ips typographus (European spruce bark beetle): 145733609
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Entry
145733609 CDS
T11912
Name
(RefSeq) uncharacterized protein LOC145733609
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ity Ips typographus (European spruce bark beetle)
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ity03000
]
145733609
Transcription factors [BR:
ity03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
145733609
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
145733609
NCBI-ProteinID:
XP_081842632
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Position
LG9:5148901..5165471
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AA seq
385 aa
AA seq
DB search
MCEGGFNAAEGFSRMASLGGTPIGMPQSLQSPQNVKKPEDHIKRPMNAFMVWSRLQRRKI
AQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTL
RKEGYPYSIPYPSVPMDALRAGMASSMGQSMASYYNPSAAYGSLSAASMAAAAAAAQQSA
AMSAGLTGPGQVVTSMDAMKYSMEADKYRSPYMPPSTLAMSMYSDPKYMESNSKSYLERN
YLDSTSALTKAYFETSKMYMDGKYNGDTTRPYPGLDIGKMYDGSVQQQAHPGLGGGNQIG
SPRSESPSEGKANTQERLDGASSSSSTTTSSAGASPGGIPSYYPSSAMQQGNSVPPGILP
MAQYASQYPSQTPGSEFRRPLTVIF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaaggcggtttcaatgccgccgaaggattttcgaggatggcctccttgggaggc
accccaatcgggatgcctcaaagcctccaaagtcctcaaaacgtgaaaaaaccagaagac
cacatcaaaagacccatgaacgctttcatggtctggtcgcgattgcaacgtcggaaaatc
gcccaggagaatcccaaaatgcataattctgaaatatcaaaacgactcggtgcagaatgg
aaactgttaacagaagacgaaaaacgtccctttatcgacgaagcaaaacgtttaagggca
atgcacatgaaagaacatccagactacaaatatcgaccacgcagaaaaccgaaaacttta
aggaaggaaggttatccctactccatcccgtatccatcagtgccaatggacgcattaaga
gcaggaatggcttcgagtatgggtcaatctatggctagttactacaatccatcggcagct
tacggatcattgagcgcagcttctatggcagctgcagctgcggccgcccagcaatcagct
gctatgtctgcaggtctaacaggtcccggacaggttgtaacatctatggatgccatgaaa
tactctatggaagcggacaaataccgttcaccctacatgccaccatccaccctagcaatg
tccatgtactccgacccgaaatacatggaatcaaactctaaaagctacctggaaagaaat
tatttggactctacctccgccctaaccaaagcctactttgaaacctccaagatgtacatg
gatggcaagtacaacggtgacacaaccagaccatatccaggtctggatattggcaaaatg
tacgatggtagtgtccaacaacaggcacatcctggattaggtggtggtaaccagattgga
tcacctcgaagtgaatcaccctcagaaggaaaagccaacacgcaagaaagactggatggc
gctagttcgtctagttctactaccacgtcatcggcgggagcttcacctggaggtattcca
agttattatccgagtagtgccatgcagcaaggtaattcggtaccaccgggaatattgcca
atggcacagtacgccagtcagtatccgtcacaaactccaggaagtgagtttagaaggcca
ctcactgtgattttttga
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