Ips typographus (European spruce bark beetle): 145734089
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Entry
145734089 CDS
T11912
Symbol
Gnf1
Name
(RefSeq) germ line transcription factor 1
Organism
ity Ips typographus (European spruce bark beetle)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
AAA_30
AAA_14
AAA_22
RuvB_N
AAA_18
Zeta_toxin
PTCB-BRCT
Rad17
AAA_17
nSTAND3
SKI
RNA_helicase
AAA_5
AAA_16
AAA_assoc_2
NTPase_1
AAA_33
AAA_3
PoNi_C
Motif
Other DBs
NCBI-GeneID:
145734089
NCBI-ProteinID:
XP_081843328
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Position
LG9:complement(6967028..6972750)
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AA seq
1025 aa
AA seq
DB search
MSKDIRSFFTVLSKKSSSTKKPAIPLVDSDDEVIESTPEPPKGQKKRKGQILSSDSEDDT
KKPSKGSKKKIAKKDSKVKEEKPKLKPIDLDSINMPIQQSKVEYVPSSNDDDWALTSLVN
KGQKKKESSKKKKPVETGVHKDKKFEKTLEDLDQDSDDTILLENLDVLDKTLEEALKAEN
SGCTQPNTETKPKEGKVVDISPATPKKAEKRGRKNSEATPKSNKKPKLEQTDSGFDADLE
KWAKKRQSTDLYMAYLHRGGPKNHGQKEYPKGKPDCLKGLTFLRTGVLDSLEGDEFGALV
ADHGGRIVHSISKKVNYLVVGDEPGPAKLEKARKYNIPEITEDQFLDLILTKSGQKPKYV
SRMESEDLGIDSSLIHDLSPDLSEADEKEPIKAKTDGFPSKTEPKNETSPKKSSVKSKSS
ESKEVTKVKKEVSEKTISSSKNSTAKVNEVSADNLTWTEKYKPTNMKAVIGQQDSNSNMN
KLKRWLENWFKNADPEVRKKIPKPTQYNQMDGGYFKAALLSGSPGVGKTTTATLVAKELG
FDIVEFNASDTRNKKLLHEEISNMMKSKTLAGFKTGEGLRQKRVLLMDEVDGMAGNEDRG
GIAELINFIKTAQFPIICMCNNRDLPKMRSLVNYCFALKFGKPNVMQVRGAMMSICFKEG
LKIQPDALSELITGTGCDIRQTLNHLSMWSAAEKSLSAATVKKESQNSQKDVVIGVWDMI
RKVFNKSENKEMTLLDKARLFFYDYSFGPMFVQENYLNVTPECTGPSNKKTVETLLRKHL
TADSLSRSDLIEARIRSSNNWALLETQAYLSTVLPSYYLSGTLGQVRFPGWFGKNSQRNK
CLRMTGEIYSHSRTTISGDKTSVRLDYAEPLTGKLLRPLIEKKADGVDETLEIMKAYSLL
REDLTNLCELMTSFSNRNHNPFDKVASTVKAALTRKYNKVMVLSIAPPTVSKKKKTATNE
EELFGEEVEVSDEDNDEDNIDNDGLIKVKSKDTAKAGPSKQSQKEKKPRGKSSKSSDSKP
KGKSK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggatattcgatctttcttcactgtgctttcaaaaaagtcttcaagcaccaaa
aaacctgccattccattggtagattcggatgatgaagtgattgaaagcactccagaaccg
ccaaaaggacagaaaaaaagaaaagggcaaatcctcagttcagactctgaagatgacact
aagaaaccttctaaaggcagtaaaaaaaagattgccaagaaagacagtaaagttaaggaa
gagaaaccaaaattaaagcccattgatttagatagtattaacatgcctatacaacaaagc
aaggtggagtatgttccaagttccaatgatgatgattgggcattaacaagtttggtaaat
aaaggccaaaaaaagaaggagagtagtaaaaagaagaaacctgtagaaactggtgtacac
aaggataagaagtttgaaaaaaccctggaagacctggatcaagatagtgatgacacaatt
ttactggaaaatttggatgttttggataaaacattagaggaagcacttaaagctgaaaat
tcaggctgcacacaacctaacactgaaacaaagccaaaagagggtaaagtagtggatata
agcccagcaacaccaaaaaaagctgaaaaacgtgggagaaagaactctgaagccacacca
aaatctaataagaagccaaagttggaacaaactgattcaggttttgatgctgacttggaa
aagtgggctaaaaaacgtcaatctaccgatttgtatatggcttacttgcataggggtggg
cctaaaaatcatggtcaaaaagaatatcccaagggtaaacctgactgtcttaaaggttta
acatttctccgcaccggagtgctggattctttagaaggagatgagtttggggctttagtt
gctgatcatggaggacgcatagttcactctatatctaagaaagtaaactacttggtcgtg
ggcgatgaacctggacctgcaaagttggagaaagcgcgaaaatacaacattcctgaaatc
acggaagatcaatttctcgacctaatcttgactaaatcaggacagaagcccaaatatgtg
tctaggatggaatctgaagatttgggcattgacagttcattgattcatgatttgtcccct
gatttaagtgaagcagatgaaaaggagccgattaaagccaaaactgatggtttcccttca
aaaactgagccgaaaaacgagaccagtccgaaaaaatcgtcagtgaaaagtaaatcttca
gagagtaaagaagtcactaaggttaaaaaagaagtgtcagaaaaaactataagtagtagt
aaaaattctacagccaaagtcaatgaggtttcagctgacaatttgacatggactgaaaaa
tataagcctactaacatgaaggctgtaattggccaacaagactcaaacagtaacatgaac
aaactaaaacgttggctggaaaattggtttaaaaatgccgaccctgaggttagaaagaaa
attccaaagcccactcagtacaaccaaatggacggtggttatttcaaagccgccttgtta
agtggttctcctggagttggtaaaaccaccacagcaacgttggtagctaaagaattgggt
tttgatatagtggaattcaacgcatcggacacacgcaacaaaaagttgctgcacgaggaa
atttctaatatgatgaagtcgaaaactttggccggtttcaagactggtgagggtttacgt
caaaaaagggtcttgttgatggacgaagtggacggtatggccggcaacgaggatcgggga
ggcattgccgaactgattaactttattaagacggcgcagtttccgattatttgtatgtgc
aacaatcgggatttgcctaaaatgcgcagtttggttaattactgttttgcactcaaattt
ggcaaacccaatgttatgcaagttagaggggccatgatgtcaatatgtttcaaagaaggc
cttaaaatccaacccgatgcgctatccgaactaatcacgggcaccggttgcgacatccgt
caaactctgaaccacctgtcaatgtggtcggcagccgaaaaaagtctttcagcggctacc
gttaaaaaggagtcgcaaaactcgcagaaagacgtcgtaatcggcgtgtgggacatgata
cgtaaagtgtttaacaagagcgagaacaaggagatgactttgctggataaggcgcggttg
ttcttttacgactacagtttcggacccatgtttgtgcaagagaattacttaaacgtcact
cctgagtgcacaggtcctagcaacaaaaagaccgtagaaactttgctccggaaacacttg
acggcggattcgttgagccgtagcgatttaattgaggctagaattcggagcagcaacaac
tgggccttgctggaaactcaagcttatctatctacagtgttgccaagttactacctatca
ggcactttggggcaggtccgttttcctggttggtttggaaagaactcgcaacgaaacaaa
tgcctaagaatgaccggggagatttactcacattcaagaacaactatttcaggtgataaa
acatcagttagactagattatgcagaaccgttgaccggtaaactgctccggcctttaata
gagaagaaagctgatggtgtagatgagactcttgaaattatgaaggcctactcgctgctt
cgtgaagatctcaccaatctttgcgagttgatgaccagtttcagtaatcgcaaccataac
ccattcgataaagttgcctctacagttaaggcggctctgacacgaaaatacaacaaagtt
atggtcctaagcattgcacctccgacagtgtcgaaaaagaagaaaacagccacaaatgaa
gaagagctgtttggtgaggaagtcgaagtctcagacgaagacaatgacgaagataatatt
gataacgacggcttgattaaagttaaaagtaaggatacggcgaaagcgggaccgagtaaa
cagtcacaaaaggagaaaaaacccagaggaaaatcttctaaaagcagcgatagtaaaccc
aaaggaaaatccaaataa
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