Ips typographus (European spruce bark beetle): 145734263
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Entry
145734263 CDS
T11912
Symbol
Cbp80
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity03013
Nucleocytoplasmic transport
ity03015
mRNA surveillance pathway
ity03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145734263 (Cbp80)
09122 Translation
03013 Nucleocytoplasmic transport
145734263 (Cbp80)
03015 mRNA surveillance pathway
145734263 (Cbp80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ity03019
]
145734263 (Cbp80)
03041 Spliceosome [BR:
ity03041
]
145734263 (Cbp80)
Messenger RNA biogenesis [BR:
ity03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
145734263 (Cbp80)
Spliceosome [BR:
ity03041
]
Common components
Common spliceosomal components
Cap binding complex
145734263 (Cbp80)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
CPSF100_C
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
145734263
NCBI-ProteinID:
XP_081843664
LinkDB
All DBs
Position
LG9:complement(9561931..9564641)
Genome browser
AA seq
794 aa
AA seq
DB search
MSRRRPHEEEDGYDRAYKKRRRVSENQEIEDRLESLILRVGEKSTSSLESNLEGLASVLE
ADLSTFRMKILRILTDCAIRMPEKCTIYTTLVGLLNAKSFNFGGEFVEYMVKTFKEALKS
CKWEAARYSLRFLADLVNCHVISATSLLQLLDNMIDAANEDSVPQVRRDWYVFAILSTLP
WVGRELYEKKEQALEHLLVQIEVFLNKRAKKHHNALKVWASDSPHPQEEYLDCLWAQIRK
LRQDNWAEKHIPRPYLAFDSILCEALQHNLPSILPPPHHDSYKYPMPWVVFRLFDYTDCP
EGPILPGAHSIERFLIEEHLHSIIEMYHLERKDCAAHLLNFPYKLKIPLEYCIVEVIFAE
LFHMPTPRYLEICYGSILIELCKLQPSSMPQVLALATEMLFHRIDTMNVSCFDRFVSWFS
YHLSNFQFRWRWEDWEMCVNLEPDHPKPKFVREVMLKCLRLSYHQRIREILPESFAAFIP
VRPEPEYKYAKESEAVNLPGTATAHQLVVTIRQKCTPEEVLAVLKDLPNPRSDEEGDGRF
NPLKIDVFVQTLLNLGSKSFSHSFAAISKFHYVFKILADSEEAQICILRNMFELWHDHQQ
MMVVLIDKMLKTQIVECSAVANWIFSKEISSEFTKNYIWEILHLTIKKMNRHVVKLTGEL
TEAREKLARAEESSESESDEEKKKSEDTEKPSEEMVERMEEKLEAAQADQKNLFLIIFQR
FIMILSEHLVRCDTDGKDYNTHWYRWTIGRLQQVFLSHHEQVQKYSSTLETLLFTQDLDP
HILEIFQQFVSLRG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaagacggcctcatgaggaagaggacggttatgatagggcttacaagaaacgc
cgtagggtttccgaaaatcaagaaattgaagatcgtctggagtctctgatattgcgagtc
ggtgaaaagagtacgtcatctctagagtcaaaccttgaggggttggctagcgtgctggaa
gctgatttgagtacatttcgaatgaaaattctcagaattttaactgactgtgctattcgt
atgccggaaaaatgcaccatttacactactttggtaggcttactgaacgccaaaagtttc
aattttggtggtgaatttgtggagtatatggtgaaaacttttaaagaagcccttaaaagt
tgcaagtgggaagctgcacgctactcactgaggtttttggctgaccttgttaactgtcat
gtgattagtgctacatcattgttgcagttactggataacatgattgatgctgcaaatgaa
gattcagtgcctcaagtgcgcagggattggtatgtttttgctatactttctacactgcct
tgggttggaagagagttgtatgaaaaaaaagaacaagctctagaacatttgcttgtacag
attgaagtgtttttaaataaaagagcaaaaaaacatcataatgctttgaaggtttgggca
agtgacagtccacatcctcaagaagagtatttagattgtttgtgggcacaaataagaaag
ttgagacaggataattgggcagaaaaacatattccccgcccttatttggcttttgactct
attctgtgtgaggctttgcagcataatttacctagtattctgccaccaccacatcatgat
tcatataaatacccaatgccttgggttgtcttcagactgtttgactacactgactgtcca
gaagggccaatattaccaggagctcactcaattgaaagattcctaattgaagaacattta
cactctataattgaaatgtatcatcttgagcgcaaagactgtgcagctcatttattaaac
ttcccatataaattaaaaataccacttgaatactgcattgttgaagtaatatttgcagaa
ctatttcatatgccaacacccagatatctggaaatttgctatggatccatattgattgag
ctgtgcaaattacagcctagttcaatgccacaagtgcttgctctagccactgaaatgcta
tttcatcgaattgacaccatgaatgtatcttgctttgaccgttttgttagttggttttcc
tatcatcttagcaatttccagttcagatggagatgggaagactgggaaatgtgtgttaat
ttggaacctgaccacccaaaaccaaaatttgtacgtgaggttatgttaaaatgcttgaga
ctctcttatcaccaaagaataagagaaattcttcctgaatcatttgctgcttttattcct
gtgagaccagaaccagaatacaagtatgctaaagaatcagaagctgtaaatctgcctggc
actgcaactgcccatcaattagtagtgacaattcgtcaaaagtgtactcctgaagaggtt
ttagcagttttaaaggatttacccaacccaagatctgatgaagaaggtgatggaagattc
aacccattaaagattgatgtgtttgttcaaactctgttgaatttgggatcaaaaagtttt
tcacacagttttgcagcaatttcaaagttccactatgtgtttaaaatcttggctgactct
gaagaagcccagatatgtattttgagaaacatgtttgaactgtggcacgaccatcaacaa
atgatggtggtccttattgacaagatgcttaaaactcaaattgtggaatgttcagctgta
gcaaactggattttttctaaggaaatcagctcagaatttaccaaaaactacatatgggaa
atcttgcatcttaccataaaaaagatgaatagacatgtggttaagttgactggagaactg
acagaggcgcgcgaaaaactggccagagctgaagaatccagtgaaagtgagagtgatgag
gagaagaagaaaagtgaagacacagaaaaaccttcagaagagatggtggaaaggatggaa
gaaaagttggaggcggcccaagctgatcaaaaaaatctgttcctgatcatcttccaaaga
tttataatgattctctcagagcatttggtcagatgcgacacagatgggaaggactacaac
actcattggtatagatggactattggaagattgcagcaggtgtttttgagccaccatgaa
caggtgcagaaatacagttccaccttggagacgctgctgtttactcaagacttggacccc
catattttagaaatatttcaacagtttgtgtctcttcgtggttaa
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