Ips typographus (European spruce bark beetle): 145735436
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Entry
145735436 CDS
T11912
Symbol
me31B
Name
(RefSeq) ATP-dependent RNA helicase me31b isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
145735436 (me31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ity03019
]
145735436 (me31B)
03036 Chromosome and associated proteins [BR:
ity03036
]
145735436 (me31B)
Enzymes [BR:
ity01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
145735436 (me31B)
Messenger RNA biogenesis [BR:
ity03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
145735436 (me31B)
mRNA degradation factors
5'-3' decay
Decapping complex
145735436 (me31B)
Chromosome and associated proteins [BR:
ity03036
]
Eukaryotic type
Gene silencing
piRNA pathway
145735436 (me31B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
145735436
NCBI-ProteinID:
XP_081845463
LinkDB
All DBs
Position
LG11:7227237..7233731
Genome browser
AA seq
453 aa
AA seq
DB search
MITDRISVNHLTMNKICYRDVDPKKETLDTNIDDLGWKAKLKIPPKDHRIQTSDVTDTKG
NEFESFCLKRELLMGIFEKGWEKPSPIQEAAIPIALSGKDILARAKNGTGKTGAYSIPVL
EQIDPLNDYIQALVIVPTRELALQTSQICIELAKHLQPIEILQLRIMVTTGGTNLRDDIM
RIYQKVQVIIATPGRILDLMEKGVAQMDHCRILVLDEADKLLSQDFKGMLDTVIKNLPPK
RQILLFSATFPLTVEQFMRKHLNEPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFS
KLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRSGLCRNLVC
SDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIE
QELGTEIKPIPKVIDPKLYVAKPGDEELEENDK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgataaccgacagaatttctgtgaaccatttgacgatgaataaaatttgttacagagat
gttgaccccaaaaaagagacactagatactaatattgatgacttgggatggaaggccaaa
ttgaaaattcctccaaaagaccacaggatccagacaagtgatgtgactgatacaaaaggc
aacgaatttgagtcattctgtctgaaacgggaactgttaatgggtattttcgagaaaggc
tgggaaaaaccatcaccaatccaagaagcggcgattccaatagcgttgtccggaaaagac
atacttgctagagcaaaaaatggaacaggtaaaactggtgcctactcaataccagtactg
gaacaaatcgatccattaaatgactacattcaggcattagtgattgtcccgacgagggaa
ctcgcactacaaacgtcccaaatctgcatagaactagctaaacacttgcagcccatagaa
atattacagctccgcataatggttaccacgggtggtactaatctgcgagacgacattatg
aggatttatcaaaaggttcaggtgatcattgccacgcccggtcgtattttggatctcatg
gagaaaggagtggcacaaatggaccactgcagaatcctagtattagacgaagccgacaag
cttctatcacaagactttaaaggtatgctcgatactgtgatcaaaaaccttccaccgaag
aggcaaatcttgctgttctccgccacgtttccactgactgtggaacagtttatgcggaag
cacttgaatgagccctacgagattaacctgatggaggagctgacattgaagggggtcacg
caatattacgctttcgtgcaagaacggcagaaagtccattgtttaaatactctcttttct
aagttacaaatcaaccaaagtattatattttgtaattcgactcaaagagtcgagctatta
gcgaagaaaatcacagagctggggtactgctgctactacatacatgcgaaaatggcgcag
gctcatcgaaacagggttttccacgatttcagatcgggactgtgcaggaatctagtatgt
tcggacctgttcacaagaggtattgatgttcaagccgtgaacgtcgtaattaactttgac
ttccctaagatggcggagacctacttgcatcgtattggtaggtctggacgtttcgggcac
ttgggtattgccatcaacttaataacatacgacgatcggttcgccctgcaccgcattgaa
caggaactgggaacggaaatcaagccgattcccaaagtgattgatcctaaattatacgtc
gctaaaccgggcgacgaggagcttgaggagaacgacaagtaa
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