Ips typographus (European spruce bark beetle): 145737768
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Entry
145737768 CDS
T11912
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity03013
Nucleocytoplasmic transport
ity03015
mRNA surveillance pathway
ity03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145737768
09122 Translation
03013 Nucleocytoplasmic transport
145737768
03015 mRNA surveillance pathway
145737768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ity03019
]
145737768
03041 Spliceosome [BR:
ity03041
]
145737768
03009 Ribosome biogenesis [BR:
ity03009
]
145737768
03012 Translation factors [BR:
ity03012
]
145737768
Enzymes [BR:
ity01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
145737768
Messenger RNA biogenesis [BR:
ity03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
145737768
mRNA cycle factors
Stress granule specific factors
145737768
Spliceosome [BR:
ity03041
]
Complex C
Other components
EJC/TREX
145737768
Ribosome biogenesis [BR:
ity03009
]
Eukaryotic type
90S particles
Helicases
145737768
Translation factors [BR:
ity03012
]
Eukaryotic type
Initiation factors
eIF-4
145737768
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
ResIII
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
145737768
NCBI-ProteinID:
XP_081848713
LinkDB
All DBs
Position
LG14:complement(707781..709434)
Genome browser
AA seq
435 aa
AA seq
DB search
MANTNRNAAFEDLSNVEFETTQDVEVIDSFGNMNLNDDWTRRIFSYGFEKPSSHPAASIK
PIIKGRDVIAQAQSGTGKTATFSIAILQSIDVTMRETQVLCLSPTRELAVQIQKVVLALG
XYMNVLCHACIGGTNLGEDIRKLDYGKHVVSGTPGRVYDMIRRRSLRTRAVKXLILDEAD
EMLNKGFKEQIYDVYRFLPPSTQVVLISATLPHEILESTSKFMTEPVRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTIHASCHLCNTXRKVDWLTEKREXSNFTVSAMHGD
MPQKERDNIMKEFRSGQSRVLITTDVWARGCTKQSVIGQXKSMKWISYRYDVQQVSLVIN
YDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
KLFIIIICICTDNVE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacaaacagaaatgcagcctttgaggatttatccaatgtggagtttgaaacc
acgcaagatgtggaagttatcgatagtttcggtaatatgaaccttaacgatgactggact
agaaggattttttcgtacggatttgagaaaccatcaagccatccagcagcgagcattaaa
ccgattataaagggccgagacgtgattgcccaagcccaatcgggtactggtaaaacggcc
acattttctattgctatactgcaatcaattgatgtgacaatgagggaaactcaagtgctc
tgcttgtccccaacacgcgaattggcggtgcaaatacaaaaagttgttctagctttggat
tacatgaatgtcctttgccatgcctgcattggtggcaccaatttgggggaggatattaga
aagttggattatggaaaacatgttgttagtggcacccctggaagagtttatgacatgata
cgtagaagatctctacgtaccagagcggtaatgctgattctagacgaggcggacgaaatg
ttaaacaaaggcttcaaagagcagatctatgacgtgtacagattcttgccgccctccact
caagtcgtgttgatatcggcaacgttgccgcacgaaattttggaatccacttcaaaattc
atgaccgaaccggttcgtatcttggtcaagcgcgacgaactgacactggagggtatcaaa
caattcttcgtggcggtggagcgggaagaatggaagtttgacacattgtgcgacctctac
gacacgctgaccatacacgcaagctgtcatctttgcaacaaaaggaaggtggattggttg
acggagaaaagagagagcaatttcacggtaagcgcgatgcacggtgacatgccgcagaaa
gagagagacaacattatgaaagagttccgatcgggacagagcagagttttgatcacgaca
gacgtgtgggctagaggttgtactaaacagtctgtgattggtcaatgaaaatcaatgaag
tggatttcttacaggtatgacgtgcaacaagtcagtttggtgatcaactacgatttgccc
aacaatcgtgaattgtacattcacagaattggcaggtcgggtcgttttggtcgtaaaggt
gtggccattaattttgtcaagtcagatgatatcaggattttgcgtgacatagaacagtac
tactctactcaaattgatgaaatgcccatgaatgtcgctgatctaattaagttatttata
ataataatttgtatttgtactgataatgttgaataa
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