Ips typographus (European spruce bark beetle): 145738821
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Entry
145738821 CDS
T11912
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ity
Ips typographus (European spruce bark beetle)
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ity03019
]
145738821
03041 Spliceosome [BR:
ity03041
]
145738821
Messenger RNA biogenesis [BR:
ity03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
145738821
Spliceosome [BR:
ity03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
145738821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_MUD2_C
RRM_occluded
RRM_ACIN1
RRM_3
DUF4523
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
145738821
NCBI-ProteinID:
XP_081850022
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All DBs
Position
LG16:4874046..4980970
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AA seq
435 aa
AA seq
DB search
MLFVPFTVPAFAPTMGAAVTTLPNMGTPKVTMSDNGSKIMVLSSGNNNSLPYVEHYKELK
TGWVSSSNVNTSVNQPTTLLAVPPMMTQQPSNAVPTVPLQIKTTSTIVTPPVINPAPKLD
TSKHHHIFVGDLSPEIETQTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFIKKGEAE
SAIAAMNGQWLGNRSIRTNWATRKPPTAKNEASKPLTFDEVYNQSSPTNCTVYCGGITNG
LTEELMQKTFAPFGTIQEIRVFKEKGYAFVRFSTKESATHAIVAVHNTDINGQVVKCSWG
KESGDPNNAPTANQTISGTSFPYGTYGQQLGYWYPQSYTAASTSQMSAGQFIGGMQGYAY
GPIGGYQSPSYAMGMGLQVPAAATSWQSIPAPSQIPTTPQQLATPTTTLQQPGIVFPIQQ
YQLTEDTEWLTPLLV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcgttccgttcacggttccagcttttgctcccaccatgggagccgctgttacc
actcttcccaatatgggcactccaaaggtgactatgagtgacaatggcagtaagattatg
gttttgtcctctggcaacaacaactccctaccgtacgtcgagcattataaggaattgaag
acaggatgggtatccagttctaatgtcaacacatcagtaaaccagccaaccaccctactg
gctgtaccccctatgatgacgcaacaaccttctaatgcggtaccgactgtacctttgcag
atcaaaacgacttcaacaattgtgacgccacccgtgattaatccagcaccaaaattagat
acttcaaaacatcatcacatctttgtcggggacctcagcccggaaattgaaactcaaact
cttcgggacgcttttgcagcttttggggaaatatcggattgtcgtgttgttcgtgaccca
caaactttgaagtccaaaggatacggattcgtttcattcatcaaaaaaggggaagctgag
agtgctatagcagcaatgaatggtcaatggcttggaaatcggagcatccgcactaattgg
gccactcgtaaaccgccaactgccaaaaacgaagcatcaaaaccactgacattcgatgag
gtatacaatcaaagtagtccaacaaattgcactgtctactgcggaggaattacaaacggt
ttgacagaagaactaatgcagaaaacttttgctcctttcgggaccatacaagagattcga
gtttttaaagagaaaggttatgcttttgtcaggttttctacgaaagaatcagcaacccat
gctattgtagctgtccacaacactgatatcaacggacaagtggtgaaatgttcttggggg
aaagaatcgggtgaccctaacaacgcccctacagccaaccagaccatatcaggaaccagc
tttccttatggtacctacggccaacaattagggtattggtaccctcagagctacactgcc
gccagcacatcccaaatgtcagcaggccaattcattggtgggatgcagggttatgcttac
ggacccatcggtggttatcagtcaccctcctacgctatggggatgggacttcaggtacca
gcagcagcaacttcatggcagagcattccagctccttcacaaattccgactactccacag
cagttggctacaccaaccaccactcttcaacaacctggaatagtgtttccaattcaacaa
tatcagttgacagaagataccgagtggttgacacctctcctggtatga
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