Ips typographus (European spruce bark beetle): 145739884
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Entry
145739884 CDS
T11912
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
ity Ips typographus (European spruce bark beetle)
Pathway
ity03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ity00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145739884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ity03041
]
145739884
Enzymes [BR:
ity01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
145739884
Spliceosome [BR:
ity03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
145739884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
nSTAND3
nSTAND_NTPase5
TsaE
T2SSE
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
145739884
NCBI-ProteinID:
XP_081851349
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MSKPKKSRRRYESDSDSSMDSEEEARRKDLQERDEFAERLKKKDEAKTRNIVHASEKKAY
EEAAKRLQLEHAERDKIIPKLRVESRRKYLEKRKEDKLVELEADIQDDEYLFEEEVLTER
EKKERLHKKELLQLAQEHEKARELERVQRYHMPRDLGKDSTADYVEVDELEKVPQAEQKK
WEKDQMASAVFKFGAKDAVKKDEYELLLEDQIDFIQALQMPGSKNKIKKEPELTEYEKKK
LTLEETKQSLPIYPFRDDLIQAIKEHQVLIIEGETGSGKTTQIPQYLHEAGFTSDGKKVG
CTQPRRVAAMSVAARVAQEMGVKLGNEVGYAIRFEDCTSERTIIKYMTDGTLHREFLSEP
DLQSYSVMIIDEAHERTLHTDILFGLVKDIARFRPDLKLLISSATLDAQKFSQFFDEAPI
FRIPGRRFPVDIYYTKAPEADYVDACVISVLQIHVTQPLGDILVFLTGQEEIETCQELLQ
DRLRRLGTKVKELIILPVYANLPSDMQAKIFEPTPPGARKVVLATNIAETSLTIDNIIYV
IDPGFAKQNHFNSRTGMESLMVVPISKASANQRAGRAGRVAAGKCFRLYTAWSYKHELED
NTVPEIQRINLGNAVLMLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHHGELT
KMGRRMAEFPVDPMMAKTLLASEKYKCAEEVVTITAMLSVNSAIFYRPKDKIIHADTARK
NFNNIGGDHLSLLNVYNQWKDTDYSLQWCYENFIQYRSMKRARDVREQLVGLMQRVEIEM
VSNVTETVDIRKAFTAGYFYHIARLSKGGNYKTVKHNQTVTIHPNSALFEELPRWILYHE
LVFTTKEFMRQVIEIESKWLLEVAPHYYKPKELEDSTNKKMPKTVGRSTRTE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacctaagaagtctcgccgaagatatgagtctgattctgactcgagcatggat
agtgaagaggaagctcgaagaaaggatttgcaggaacgagatgaatttgccgagagattg
aagaagaaggatgaagctaaaacgagaaatattgtgcatgcctctgagaaaaaagcgtat
gaggaggcggcaaaaagacttcaattggaacatgcagaacgcgacaaaattattccaaaa
cttagggttgagtcgagaagaaagtatttggaaaaacgcaaagaggacaaactggttgaa
ttagaagctgatattcaagatgatgaatatttatttgaagaagaagttttaacagaacga
gagaaaaaagagagattgcacaaaaaagaattgctgcaattagcgcaggaacatgagaaa
gcaagagagttggaaagagttcaaaggtatcatatgccaagagatttgggcaaagactca
accgcggattatgtggaggtagacgaattggaaaaagtgccccaagctgaacagaaaaaa
tgggaaaaagaccaaatggcatctgccgtgtttaaattcggagctaaggatgccgtcaaa
aaagatgaatatgaacttttacttgaagatcagattgatttcattcaagctcttcaaatg
ccaggctctaaaaacaaaataaaaaaagaacccgaacttaccgaatacgaaaagaagaaa
ctaactcttgaagaaaccaaacagagtttaccgatttatccattcagagacgatttgata
caagctatcaaggaacatcaagttttaattattgaaggtgaaacaggatctggaaaaact
acacaaattccacaatatctgcatgaggctggatttacatctgacggaaagaaggttggt
tgtactcagccacggagagtagcagccatgtcagtagcggcgcgtgtagcacaagaaatg
ggcgttaaactaggcaacgaagttggatatgctattcgttttgaggattgcacgtctgaa
cgcactataataaaatacatgactgacggcaccctgcatagagaatttttatcagagcca
gatttacagtcatatagtgttatgataattgacgaagcccatgagagaactctccatact
gacatcctgttcgggcttgtaaaagatatagctcgatttagaccagatttgaagttgctt
atttccagtgcaacactagatgctcaaaagttttcccagtttttcgacgaagctcctata
ttcagaataccaggaagacgttttcctgttgatatttattacactaaagctcctgaagcg
gactacgtggacgcttgcgtaatttcagttttgcagatccacgtaactcaacccttggga
gatattttagtatttctaaccggtcaggaagaaatagaaacgtgtcaggaattattgcaa
gatcgtttgagacgattaggcaccaaagtaaaggagttaataattctaccggtttacgca
aatttaccaagcgatatgcaagcgaaaatatttgaacctacaccgccaggagctagaaaa
gttgttctagccacgaatattgcagagacgtctttaactatagacaatattatatacgtg
attgatccaggatttgcgaagcagaatcactttaattcgcgaacgggaatggaaagttta
atggttgttccaatctcgaaggcatcggctaatcaaagagccggtcgagcaggcagggtt
gcagcgggaaaatgttttaggctgtatacagcctggtcatataaacacgagttggaggat
aatacggtaccagaaattcagcggataaacctcggcaatgctgttttaatgctgaaggca
ctaggaataaacgatctggtgcattttgacttcctcgatccgcctcctcatgaaacttta
gtattagctttagaacagttatacgctttaggagctttaaatcatcatggtgaattaacc
aaaatgggccgaagaatggctgagtttccagttgatcccatgatggccaaaacgctgttg
gcttcagaaaagtacaagtgcgcagaagaagtggtcacaataactgcaatgttgtctgta
aatagtgcgattttctataggccaaaagacaaaataattcacgcagatacggctagaaaa
aactttaataacatcggcggagatcatttaagcttgttaaatgtatataaccagtggaag
gataccgattattcattgcaatggtgttacgaaaatttcattcagtacaggtcaatgaaa
cgagccagagatgtcagggaacaactagtgggtttaatgcaacgggttgaaatagaaatg
gtttcaaacgtgacagaaactgtagatatacgaaaggcctttaccgcaggatatttttac
catatagcaagactgtcaaaaggtggaaactataaaacggtgaaacacaatcagactgtc
actattcatccaaatagtgcattatttgaagagctgccacgttggatactttaccatgag
ctggtatttactactaaggaatttatgaggcaagttattgaaattgaaagtaaatggtta
ttagaagtagcgccacactattacaaacccaaagaattggaagattcaaccaataaaaaa
atgccaaaaactgtaggtagaagtacacgtactgaataa
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